Pre_GI: BLASTP Hits

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Query: NC_004631:2842453:2859402 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2859402, End: 2859884, Length: 483

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2829767:284670128467012847183483Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-91331
NC_003198:2856596:287354528735452874027483Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein9e-91331
NC_011147:2814664:283161728316172832099483Salmonella enterica subsp. enterica serovar Paratyphi A strcell invasion protein2e-89327
NC_006511:2819128:283608128360812836563483Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcell invasion protein2e-89327
NC_003197:3005842:302153530215353022017483Salmonella typhimurium LT2, complete genomeinvasion protein precursor4e-89326
NC_011083:2980356:299604929960492996531483Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,invasion protein IagB4e-89326
NC_011149:2912219:293006129300612930543483Salmonella enterica subsp. enterica serovar Agona str. SL483,invasion protein IagB4e-89326
NC_016810:3028421:304411130441113044593483Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein4e-89326
NC_016856:3026426:304177230417723042254483Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion protein precursor4e-89326
NC_016857:3028421:304411130441113044593483Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasion protein precursor4e-89326
NC_016860:3029272:304496530449653045447483Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein4e-89326
NC_016863:2974333:299002529900252990507483Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion protein precursor4e-89326
NC_017046:3027161:304285130428513043333483Salmonella enterica subsp. enterica serovar Typhimurium str. 798cell invasion protein4e-89326
NC_011094:2913500:292874029287402929222483Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein IagB8e-89325
NC_006905:2960260:297506329750632975545483Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein7e-89325
NC_011080:2982346:299803929980392998521483Salmonella enterica subsp. enterica serovar Newport str. SL254,cell invasion protein7e-89325
NC_010102:2967464:298451729845172984999483Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-89325
NC_011205:3050235:306593230659323066414483Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cell invasion protein7e-89325
NC_011274:2881306:289699928969992897481483Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein7e-89325
NC_011294:2890500:290619529061952906677483Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein7e-89325
NC_012125:2938519:295544629554462955928483Salmonella enterica subsp. enterica serovar Paratyphi C straincell invasion protein7e-89325
NC_016831:2867766:288345828834582883940483Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein7e-89325
NC_010067:84093:924719247192953483Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-84311
NC_015761:2726000:274178827417882742270483Salmonella bongori NCTC 12419, complete genomecell invasion protein4e-81299
NC_002939:2315402:233949023394902339996507Geobacter sulfurreducens PCA, complete genometransglycosylase SLT domain protein7e-24109
NC_002939:2337402:233949023394902339996507Geobacter sulfurreducens PCA, complete genometransglycosylase SLT domain protein7e-24109
AP010958:3669500:370471537047153705173459Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-23107
NC_013353:3669500:370471537047153705173459Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-23107
NC_013361:5319497:533870853387085339166459Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-23107
NC_002655:4653160:468378546837854684243459Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-23107
NC_002695:4584177:461480246148024615260459Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-23107
NC_011353:4688000:471790647179064718364459Escherichia coli O157:H7 str. EC4115 chromosome, complete genometransglycosylase SLT domain-containing protein3e-23107
NC_013008:4643825:467394746739474674405459Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelytic transglycosylase3e-23107
NC_013941:4470932:450228845022884502764477Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransglycosylase SLT domain protein2e-23107
NC_011601:4096427:412856841285684129026459Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-23106
NC_009650:65732:717407174072225486Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,putative lytic transglycosylase6e-23106
NC_011751:3285646:330080633008063301309504Escherichia coli UMN026 chromosome, complete genomeputative peptidoglycan-binding-like protein1e-22105
NC_002655:3769643:378388037838803784383504Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-22105
NC_011353:3805819:382097738209773821480504Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelytic transglycosylase PilT1e-22105
NC_013008:3761467:377570337757033776206504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelytic transglycosylase1e-22105
NC_013364:3701895:374620937462093746667459Escherichia coli O111:H- str. 11128, complete genomehypothetical protein8e-23105
NC_013722:1689125:170856817085681709014447Xanthomonas albilineans, complete genomehypothetical protein4e-22103
NC_011750:3407500:342271734227173423220504Escherichia coli IAI39 chromosome, complete genomeputative peptidoglycan-binding-like protein1e-21102
NC_012751:1296877:130924113092411309711471Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilT lytic transglycosylase, SLT domain protein2e-2098.2
NC_012751:942315:950762950762951226465Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilT lytic transglycosylase, SLT domain protein2e-2098.2
NC_002695:3702344:371668237166823717083402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-2096.7
NC_012721:770651:8356118356118368131203Burkholderia glumae BGR1 chromosome 2, complete genomeLytic transglycosylase, catalytic8e-2096.3
NC_014618:1040381:105109310510931051530438Enterobacter cloacae SCF1 chromosome, complete genomelytic transglycosylase1e-1995.5
NC_006349:1630514:165359716535971654160564Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceBapC protein2e-1994.7
NC_014305:126029:131075131075131620546Erwinia billingiae Eb661 plasmid pEB170, complete sequenceLytic transglycosylase4e-1994
NC_004547:611178:612883612883613401519Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein5e-1993.6
NC_012214:3502992:351002935100293510526498Erwinia pyrifoliae Ep1/96, complete genomelytic transglycosylase6e-1993.2
CU928145:3196173:321109232110923211568477Escherichia coli 55989 chromosome, complete genomeputative peptidoglycan-binding-like protein precursor9e-1992.8
NC_009800:2995958:301253530125353012969435Escherichia coli HS, complete genome9e-1992.8
CU928160:3030324:304524330452433045719477Escherichia coli IAI1 chromosome, complete genomeputative peptidoglycan-binding-like protein precursor9e-1992.8
NC_011748:3196173:321109232110923211568477Escherichia coli 55989, complete genomeputative peptidoglycan-binding-like protein precursor9e-1992.8
CP002516:903241:921561921561922037477Escherichia coli KO11, complete genomeLytic transglycosylase catalytic9e-1992.8
NC_011741:3030324:304524330452433045719477Escherichia coli IAI1 chromosome, complete genomeputative peptidoglycan-binding-like protein9e-1992.8
NC_016902:903241:921561921561922037477Escherichia coli KO11FL chromosome, complete genomelytic transglycosylase9e-1992.8
NC_004632:28470:381003810038552453Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,pilT protein, putative8e-1992.8
NC_010468:906957:926054926054926428375Escherichia coli ATCC 8739, complete genomeLytic transglycosylase catalytic7e-1889.7
NC_003902:1442705:144701314470131447429417Xanthomonas campestris pv. campestris str. ATCC 33913, completeHpa2 protein9e-1889.4
NC_007086:3582500:359634835963483596764417Xanthomonas campestris pv. campestris str. 8004, complete genomeHpa2 protein9e-1889.4
NC_017271:1517820:152209815220981522514417Xanthomonas campestris pv. raphani 756C chromosome, completelysozyme-related protein Hpa29e-1889.4
NC_010606:25090:392353923539861627Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceSoluble lytic murein transglycosylase8e-1889.4
NC_007508:479799:490947490947491420474Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transglycosylase HpaH8e-1889.4
NC_010688:3487000:350108835010883501660573Xanthomonas campestris pv. campestris, complete genomeputative type III secretion-system related transglycosylase2e-1788.6
NC_015761:299386:329515329515330003489Salmonella bongori NCTC 12419, complete genomepilin-like protein3e-1787.8
CP002185:3167738:318414131841413184515375Escherichia coli W, complete genomeputative lytic transglycosylase1e-1685.5
AC_000091:2976293:299269729926972993071375Escherichia coli W3110 DNA, complete genome1e-1685.5
NC_010473:3069529:308593330859333086307375Escherichia coli str. K-12 substr. DH10B, complete genome1e-1685.5
NC_000913:2975659:299206329920632992437375Escherichia coli K12, complete genomepredicted peptidoglycan-binding enzyme (pseudogene)1e-1685.5
AP010958:3474077:348909634890963489470375Escherichia coli O103:H2 str. 12009 DNA, complete genomepeptidoglycan-binding-like protein precursor1e-1685.5
NC_013353:3474077:348909634890963489470375Escherichia coli O103:H2 str. 12009, complete genomepeptidoglycan-binding-like protein precursor1e-1685.5
NC_013361:3867558:388257938825793882953375Escherichia coli O26:H11 str. 11368 chromosome, complete genomepeptidoglycan-binding like protein precursor1e-1685.5
NC_013364:3552284:356731135673113567685375Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-1685.5
NC_013961:851044:857417857417857920504Erwinia amylovora, complete genomeProtein ipgF precursor7e-1683.2
NC_011035:829945:886459886459886920462Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein LtgX3e-1580.9
NC_010699:1:209220922613522Erwinia tasmaniensis plasmid pET45, complete sequenceLytic Transglycosylase, may function in locally opening the peptidoglycan layer around the type IV transporter system3e-1580.9
NC_009714:113975:143944143944144381438Campylobacter hominis ATCC BAA-381, complete genomelytic transglycosylase, catalytic4e-1580.5
NC_008757:111292:116229116229116765537Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeLytic transglycosylase, catalytic4e-1580.5
NC_014762:1204584:122323212232321223654423Sulfuricurvum kujiense DSM 16994 chromosome, complete genomelytic transglycosylase catalytic8e-1579.3
NC_015377:34445:437664376644227462Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencelytic transglycosylase, catalytic1e-1479
NC_012856:2931995:293630529363052936778474Ralstonia pickettii 12D chromosome 1, complete genomeLytic transglycosylase catalytic3e-1477.4
NC_008609:2254392:225747422574742258106633Pelobacter propionicus DSM 2379, complete genomeLytic transglycosylase, catalytic7e-1476.3
NC_007950:185500:188601188601189140540Polaromonas sp. JS666 plasmid 2, complete sequenceLytic transglycosylase, catalytic9e-1372.8
NC_012440:1841315:186590018659001866409510Persephonella marina EX-H1, complete genomesoluble lytic murein transglycosylase3e-1167.8
NC_012438:818387:822964822964823485522Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeHpa28e-1062.8
NC_011415:3217796:323294032329403233191252Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-0961.2
NC_018607:1803500:180877418087741809490717Brachyspira pilosicoli B2904 chromosome, complete genomelytic transglycosylase3e-0857.4
NC_014330:2268773:228178822817882282501714Brachyspira pilosicoli 95/1000 chromosome, complete genomelytic transglycosylase2e-0754.7
NC_019908:982471:989710989710990426717Brachyspira pilosicoli P43/6/78 chromosome, complete genomelytic transglycosylase2e-0754.7