Pre_GI: BLASTP Hits

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Query: NC_004631:2755306:2776584 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2776584, End: 2777570, Length: 987

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2769449:279072727907272791713987Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0649
NC_003197:2894344:293783229378322938818987Salmonella typhimurium LT2, complete genomehypothetical protein0646
NC_012125:2826624:287304628730462874032987Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0646
NC_016810:2943912:296040829604082961394987Salmonella enterica subsp. enterica serovar Typhimurium strProtein csiD0646
NC_016857:2943912:296040829604082961394987Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74protein CsiD0646
NC_016863:2844883:290632029063202907306987Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein0646
NC_017046:2943929:295914829591482960134987Salmonella enterica subsp. enterica serovar Typhimurium str. 798Protein csiD0646
NC_011294:2802502:282276028227602823746987Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0645
NC_011274:2793355:281361228136122814598987Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0645
NC_006905:2857699:289251528925152893501987Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein0644
NC_016832:2743801:276389227638922764869978Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0643
NC_011080:2897977:291448229144822915459978Salmonella enterica subsp. enterica serovar Newport str. SL254,protein CsiD0641
NC_010102:2881714:290198429019842902961978Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0641
NC_016860:2917910:296140729614072962384978Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0640
NC_016856:2896630:295807629580762959053978Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein0640
NC_011149:2829811:284630228463022847279978Salmonella enterica subsp. enterica serovar Agona str. SL483,0640
NC_011083:2847318:291235229123522913329978Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0640
NC_016831:2779864:280013428001342801111978Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0640
NC_011094:2791719:284496728449672845944978Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0639
NC_008258:2905413:2906701290670129077831083Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-155547
NC_007384:2933625:2948556294855629496381083Shigella sonnei Ss046, complete genomehypothetical protein3e-155547
NC_011415:3006794:3022897302289730239791083Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-155546
CP002185:2919752:293510129351012936078978Escherichia coli W, complete genomepredicted protein2e-154545
CP002516:1165726:116977911697791170756978Escherichia coli KO11, complete genomeprotein of unknown function CsiD2e-154545
NC_016822:3065426:308074130807413081718978Shigella sonnei 53G, complete genomecarbon starvation induced protein2e-154545
NC_016902:1165726:116977911697791170756978Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-154545
AP010958:3238742:325151032515103252487978Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-154545
NC_013353:3238742:325151032515103252487978Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-154545
NC_008563:2946391:295887129588712959848978Escherichia coli APEC O1, complete genomehypothetical protein4e-154544
NC_007946:2931364:294384429438442944821978Escherichia coli UTI89, complete genomehypothetical protein YgaT4e-154544
NC_011742:2863316:287618228761822877159978Escherichia coli S88 chromosome, complete genomehypothetical protein4e-154544
NC_010468:1130000:113420711342071135184978Escherichia coli ATCC 8739, complete genomeProtein of unknown function CsiD3e-154544
CU928160:2818750:283382128338212834798978Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein3e-154544
NC_009800:2788164:280643028064302807407978Escherichia coli HS, complete genomeprotein CsiD3e-154544
NC_011741:2818750:283382128338212834798978Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-154544
NC_012947:1106000:111015411101541111131978Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-154544
NC_012967:2669182:268366626836662684643978Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-154544
NC_013361:3651150:366735236673523668329978Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-154544
NC_013364:3339768:335252633525263353503978Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-154544
NC_000913:2746886:278700727870072787984978Escherichia coli K12, complete genomehypothetical protein6e-154543
AC_000091:2747520:278764127876412788618978Escherichia coli W3110 DNA, complete genomehypothetical protein6e-154543
NC_010473:2839902:287877228787722879749978Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein6e-154543
NC_012759:2633949:267281926728192673796978Escherichia coli BW2952 chromosome, complete genomehypothetical protein6e-154543
NC_010498:2847359:286260128626012863578978Escherichia coli SMS-3-5, complete genomeprotein CsiD5e-154543
NC_011750:2928990:295508729550872956064978Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-154543
NC_002695:3468873:351117235111723512149978Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein7e-153540
NC_011353:3573641:361540836154083616385978Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein7e-153540
NC_013008:3525428:357013335701333571110978Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-153540
NC_013941:3300000:334891633489163349893978Escherichia coli O55:H7 str. CB9615 chromosome, complete genomealpha amylase family protein5e-153540
NC_011601:2998326:301484930148493015826978Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-152539
NC_002655:3538656:3578357357835735794391083Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-152538
NC_017328:2785309:2800366280036628014031038Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-148525
NC_004741:2741971:2756120275612027571571038Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-148525
NC_004337:2747917:2761484276148427625211038Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-148525
NC_007963:2232000:2254100225410022552361137Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein2e-127455