Pre_GI: BLASTP Hits

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Query: NC_004631:2755306:2774334 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2774334, End: 2774765, Length: 432

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2943929:295689529568952957329435Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-65244
NC_010102:2881714:289972428997242900155432Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-64244
NC_011083:2847318:291009329100932910524432Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tricarboxylic transport1e-64244
NC_003198:2769449:278847727884772788908432Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-64244
NC_011080:2897977:291222229122222912653432Salmonella enterica subsp. enterica serovar Newport str. SL254,tricarboxylic transport1e-64244
NC_011205:2962270:298027629802762980707432Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tricarboxylic transport1e-64244
NC_016831:2779864:279787427978742798305432Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-64244
NC_016832:2743801:276163327616332762064432Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Tricarboxylic transport1e-64244
NC_016860:2917910:295914829591482959579432Salmonella enterica subsp. enterica serovar Typhimurium strtricarboxylic transport protein1e-64244
NC_003197:2894344:293557929355792936013435Salmonella typhimurium LT2, complete genometricarboxylic transport8e-65244
NC_011149:2829811:284404028440402844474435Salmonella enterica subsp. enterica serovar Agona str. SL483,tricarboxylic transport8e-65244
NC_011274:2793355:281135828113582811792435Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-65244
NC_011294:2802502:282050628205062820940435Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-65244
NC_012125:2826624:287079328707932871227435Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-65244
NC_016810:2943912:295815529581552958589435Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-65244
NC_016856:2896630:295581429558142956248435Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stricarboxylic transport8e-65244
NC_016857:2943912:295815529581552958589435Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tricarboxylic transport8e-65244
NC_016863:2844883:290406729040672904501435Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1tricarboxylic transport8e-65244
NC_006905:2857699:289026228902622890696435Salmonella enterica subsp. enterica serovar Choleraesuis strtricarboxylic transport2e-64243
NC_011094:2791719:284270928427092843140432Salmonella enterica subsp. enterica serovar Schwarzengrund strtricarboxylic transport4e-64242
NC_010067:171053:172578172578173012435Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-63238
NC_015424:2726223:274919527491952749626432Aeromonas veronii B565 chromosome, complete genomeTricarboxylic transport2e-41167
NC_002927:5327094:533358353335835334020438Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1582
NC_014640:6971000:698516969851696985606438Achromobacter xylosoxidans A8 chromosome, complete genomeinner membrane protein 29e-1475.5
NC_008599:903530:908409908409908852444Campylobacter fetus subsp. fetus 82-40, complete genomeputative tricarboxylic transport membrane protein5e-1166.2
NC_007963:814148:813702813702814151450Chromohalobacter salexigens DSM 3043, complete genomeputative tricarboxylic transport membrane protein4e-0856.6
NC_012660:1579204:159678115967811597317537Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like membrane protein6e-0856.2
NC_014914:439285:467021467021467464444Taylorella equigenitalis MCE9 chromosome, complete genomeTricarboxylate transport protein TctB1e-0755.1