Pre_GI: BLASTP Hits

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Query: NC_004631:2755306:2773510 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2773510, End: 2774319, Length: 810

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2743801:276080927608092761618810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-156551
NC_003198:2769449:278765327876532788462810Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-156551
NC_016856:2896630:295482529548252955802978Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stricarboxylic transport2e-146518
NC_016810:2943912:295716629571662958143978Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-146518
NC_011094:2791719:284171728417172842694978Salmonella enterica subsp. enterica serovar Schwarzengrund strtricarboxylic transport2e-146518
NC_011149:2829811:284305128430512844028978Salmonella enterica subsp. enterica serovar Agona str. SL483,tricarboxylic transport2e-146518
NC_003197:2894344:293459029345902935567978Salmonella typhimurium LT2, complete genometricarboxylic transport2e-146518
NC_012125:2826624:286980428698042870781978Salmonella enterica subsp. enterica serovar Paratyphi C straintricarboxylic transport2e-146518
NC_006905:2857699:288927328892732890250978Salmonella enterica subsp. enterica serovar Choleraesuis strtricarboxylic transport2e-146518
NC_016857:2943912:295716629571662958143978Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tricarboxylic transport2e-146518
NC_016860:2917910:295815629581562959133978Salmonella enterica subsp. enterica serovar Typhimurium strtricarboxylic transport protein2e-146518
NC_016863:2844883:290307829030782904055978Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1tricarboxylic transport2e-146518
NC_017046:2943929:295590629559062956883978Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-146518
NC_011083:2847318:290910129091012910078978Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tricarboxylic transport1e-146518
NC_011080:2897977:291123029112302912207978Salmonella enterica subsp. enterica serovar Newport str. SL254,tricarboxylic transport1e-146518
NC_010102:2881714:289873228987322899709978Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-146518
NC_011205:2962270:297928429792842980261978Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tricarboxylic transport1e-146518
NC_011274:2793355:281036928103692811346978Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-146518
NC_011294:2802502:281951728195172820494978Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-146518
NC_010067:171053:173024173024174001978Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-142503
NC_015424:2726223:274819727481972749183987Aeromonas veronii B565 chromosome, complete genomeTricarboxylic transporter7e-113406
NC_012660:1579204:159736915973691598352984Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like exported protein8e-83306
NC_002927:5327094:5332474533247453334781005Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-82304
NC_014640:6971000:698571969857196986717999Achromobacter xylosoxidans A8 chromosome, complete genomeextra-cytoplasmic solute receptor family protein 1817e-82303
NC_008599:903530:907435907435908412978Campylobacter fetus subsp. fetus 82-40, complete genometricarboxylic transport3e-69261
NC_007963:814148:814148814148815137990Chromohalobacter salexigens DSM 3043, complete genomeUncharacterized protein UPF00657e-67253
NC_010002:4175809:4186540418654041875891050Delftia acidovorans SPH-1, complete genomehypothetical protein1e-52206
NC_013946:2854219:286904928690492870014966Meiothermus ruber DSM 1279 chromosome, complete genomehypothetical protein7e-45180
NC_015387:155728:165118165118166092975Marinithermus hydrothermalis DSM 14884 chromosome, complete genomehypothetical protein1e-43176
NC_018644:478077:483074483074484054981Alpha proteobacterium HIMB59 chromosome, complete genomeTripartite tricarboxylate transporter family receptor2e-24113
NC_014815:4621552:4632148463214846331581011Micromonospora sp. L5 chromosome, complete genomelipoprotein, ATP binding protein1e-24113
NC_016582:1018014:101952910195291020515987Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative tricarboxylic transport membrane protein3e-23108
NC_014831:2082304:2097004209700420980621059Thermaerobacter marianensis DSM 12885 chromosome, complete genomehypothetical protein4e-23108
NC_011958:1031592:106401610640161064960945Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein9e-22103
NC_009050:567209:569215569215570159945Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceUncharacterized protein UPF00652e-21102
NC_014632:336000:3373933373933384211029Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein2e-1996.3
NC_009848:775000:789166789166790146981Bacillus pumilus SAFR-032, complete genomeTTT family tricarboxylate membrane protein6e-1994.7
NC_014632:312000:3279963279963290061011Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein3e-1892.4
NC_008705:868623:950022950022950990969Mycobacterium sp. KMS, complete genomeUncharacterized protein UPF00654e-1892
NC_015410:3003417:300921530092153010204990Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein9e-1890.9
NC_013093:4890557:489833248983324899318987Actinosynnema mirum DSM 43827, complete genomehypothetical protein4e-1788.6
NC_020302:2219378:222304822230482224034987Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein5e-1788.2
NC_010175:3712456:373255137325513733528978Chloroflexus aurantiacus J-10-fl, complete genomehypothetical protein7e-1787.8
NC_021177:1418213:142031514203151421298984Streptomyces fulvissimus DSM 40593, complete genomePutative secreted protein1e-1687
NC_014217:4550544:458194745819474582924978Starkeya novella DSM 506 chromosome, complete genomehypothetical protein1e-1687
NC_007963:3553678:3563447356344735644511005Chromohalobacter salexigens DSM 3043, complete genomeUncharacterized protein UPF00653e-1582.8
NC_011740:3739395:374012437401243741098975Escherichia fergusonii ATCC 35469, complete genomeputative periplasmic binding protein9e-1580.9
NC_020272:3187482:319103431910343191987954Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein3e-1479
NC_016633:14000:302863028631257972Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein8e-1477.8
NC_016582:2009588:2011803201180320128161014Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1376.6
NC_015677:3685452:370636737063673707356990Ramlibacter tataouinensis TTB310 chromosome, complete genomeprotein bugT6e-1271.2
NC_013446:1889500:188954518895451890531987Comamonas testosteroni CNB-2, complete genomeTctC8e-1270.9
NC_008786:3915000:3920406392040639214581053Verminephrobacter eiseniae EF01-2, complete genomeUncharacterized protein UPF00653e-1168.9
NC_002928:507749:541700541700542695996Bordetella parapertussis 12822, complete genomehypothetical protein4e-1168.6
NC_010002:1584500:160418916041891605145957Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1067
NC_012791:4736084:4741736474173647427611026Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein3e-1065.9
NC_014364:815346:858349858349859323975Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein3e-1065.9
NC_002927:506183:543053543053544036984Bordetella bronchiseptica RB50, complete genomehypothetical protein8e-1064.3
NC_015677:1460000:146301714630171463952936Ramlibacter tataouinensis TTB310 chromosome, complete genomeextracytoplasmic binding receptor9e-1064.3
NC_019897:3810000:3864933386493338660091077Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-0963.2
NC_014640:5897421:590302859030285904023996Achromobacter xylosoxidans A8 chromosome, complete genomeextra-cytoplasmic solute receptor family protein 1502e-0963.2
NC_015458:3390674:339596833959683396786819Pusillimonas sp. T7-7 chromosome, complete genomeputative secreted protein3e-0962.4
NC_010170:1152131:116106211610621162048987Bordetella petrii, complete genomeputative secreted protein4e-0962
NC_008786:3045770:3045770304577030470321263Verminephrobacter eiseniae EF01-2, complete genomeUncharacterized protein UPF00652e-0859.7
NC_012792:310443:3171803171803181811002Variovorax paradoxus S110 chromosome 2, complete genomehypothetical protein5e-0858.5
NC_008752:2056547:2071001207100120720021002Acidovorax avenae subsp. citrulli AAC00-1, complete genomeuncharacterized protein UPF00657e-0858.2
NC_015573:3243613:3254378325437832553911014Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein4e-0755.5
NC_015563:2702787:272152227215222722508987Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein5e-0755.1
NC_010002:1879220:195331219533121954289978Delftia acidovorans SPH-1, complete genomehypothetical protein1e-0653.5
NC_011992:1912200:1913539191353919145431005Acidovorax ebreus TPSY, complete genomehypothetical protein2e-0653.1
NC_008786:5128363:514916751491675150135969Verminephrobacter eiseniae EF01-2, complete genomeUncharacterized protein UPF00652e-0653.1
NC_010645:31500:405184051841507990Bordetella avium 197N, complete genomeexported protein2e-0653.1
NC_015723:430165:4425884425884436341047Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein3e-0652.4
NC_012792:310443:329160329160330125966Variovorax paradoxus S110 chromosome 2, complete genomehypothetical protein4e-0652
NC_007974:785216:789641789641790603963Ralstonia metallidurans CH34 chromosome 2, complete sequenceUncharacterized protein UPF00655e-0652
NC_002928:3781657:3783913378391337849441032Bordetella parapertussis 12822, complete genomehypothetical protein6e-0651.6
NC_015727:1076927:109258410925841093552969Cupriavidus necator N-1 plasmid BB1p, complete sequencehypothetical protein5e-0651.6
NC_006300:60484:730567305674039984Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein5e-0651.6
NC_015723:1047418:105641710564171057412996Cupriavidus necator N-1 chromosome 2, complete sequenceextra-cytoplasmic solute receptor6e-0651.2
NC_013740:1218429:122927712292771230272996Acidaminococcus fermentans DSM 20731, complete genomehypothetical protein7e-0651.2
NC_002927:383760:400257400257401249993Bordetella bronchiseptica RB50, complete genomehypothetical protein7e-0651.2