Pre_GI: BLASTP Hits

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Query: NC_004631:2755306:2767292 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2767292, End: 2768221, Length: 930

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2743801:275459127545912755520930Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0644
NC_003198:2769449:278143527814352782364930Salmonella enterica subsp. enterica serovar Typhi str. CT18,virulence protein0644
NC_003197:2894344:292837329283732929302930Salmonella typhimurium LT2, complete genomevirulence protein0643
NC_016810:2943912:295094929509492951878930Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein0643
NC_016856:2896630:294860829486082949537930Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein0643
NC_016857:2943912:295094929509492951878930Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein0643
NC_016860:2917910:295193929519392952868930Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein0643
NC_016863:2844883:289686128968612897790930Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein0643
NC_006905:2857699:288305728830572883986930Salmonella enterica subsp. enterica serovar Choleraesuis strvirulence gene; homologous sequence to virK in Shigella0643
NC_011094:2791719:283549928354992836428930Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0643
NC_012125:2826624:286358928635892864518930Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence protein0643
NC_011080:2897977:290501229050122905941930Salmonella enterica subsp. enterica serovar Newport str. SL254,virulence protein0642
NC_011083:2847318:290288329028832903812930Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,virulence protein0642
NC_011205:2962270:297306629730662973995930Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0641
NC_011274:2793355:280415228041522805081930Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence protein0641
NC_011294:2802502:281329928132992814228930Salmonella enterica subsp. enterica serovar Enteritidis strvirulence protein0641
NC_016831:2779864:279066227906622791591930Salmonella enterica subsp. enterica serovar Gallinarum/pullorumvirulence protein0641
NC_011149:2829811:283683428368342837763930Salmonella enterica subsp. enterica serovar Agona str. SL483,virulence protein0639
NC_010102:2881714:289253528925352893443909Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-178624
NC_010067:171053:179299179299180234936Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-170598
NC_017046:2943929:294969029496902950466777Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein5e-145513
NC_009790:42112:614456144562395951Escherichia coli E24377A plasmid pETEC_74, complete sequencehypothetical protein2e-79296
NC_007385:157516:158609158609159559951Shigella sonnei Ss046 plasmid pSS_046, complete sequenceVirK4e-79295
NC_007607:87000:880308803088980951Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceVirK4e-79295
NC_010660:175200:176293176293177243951Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencehypothetical protein4e-79295
NC_017319:192482:193575193575194525951Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceVirK, required for proper localization of IcsA (VirG) at the surface of bacteria5e-79294
NC_004851:191709:193647193647194597951Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceVirK, required for proper localization of IcsA (VirG) at the surface of bacteria5e-79294
NC_011750:4947500:496427749642774965227951Escherichia coli IAI39 chromosome, complete genomeregulator of virG protein1e-78293
NC_017328:1075535:110263211026321103582951Shigella flexneri 2002017 chromosome, complete genomeVirK-like protein1e-78293
NC_007608:97092:981859818599135951Shigella boydii Sb227 plasmid pSB4_227, complete sequenceVirK3e-78291
NC_013282:1842412:186906918690691870001933Cronobacter turicensis, complete genomehypothetical protein2e-49196
NC_013892:3745749:374871537487153749650936Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-49194
NC_020211:996497:102608110260811027010930Serratia marcescens WW4, complete genomehypothetical protein1e-47190
NC_017046:2943929:295043329504332950618186Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein1e-28127
NC_017068:2786391:279456827945682795470903Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein6e-1788.2
NC_015437:438538:453418453418454320903Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF5352e-1480.1
NC_008309:1553399:155339915533991554358960Haemophilus somnus 129PT, complete genomehypothetical protein3e-1479.3
NC_010278:398521:408686408686409558873Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein3e-1376.3
NC_010939:405477:431568431568432440873Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein3e-1376.3
NC_009053:393700:403856403856404728873Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-1376.3