Pre_GI: BLASTP Hits

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Query: NC_004631:2755306:2761544 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2761544, End: 2762461, Length: 918

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2743801:274884327488432749760918Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0634
NC_003198:2769449:277568727756872776604918Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0634
NC_011094:2791719:282973428297342830669936Salmonella enterica subsp. enterica serovar Schwarzengrund strIroE2e-177621
NC_010102:2881714:288675328867532887688936Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-177620
NC_011080:2897977:289925328992532900188936Salmonella enterica subsp. enterica serovar Newport str. SL254,IroE5e-177620
NC_011149:2829811:283108728310872832022936Salmonella enterica subsp. enterica serovar Agona str. SL483,IroE1e-176618
NC_011205:2962270:296731229673122968241930Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-175615
NC_011294:2802502:280754428075442808473930Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-175615
NC_016831:2779864:278490727849072785836930Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-175615
NC_011083:2847318:289712228971222898057936Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,IroE1e-175615
NC_003197:2894344:292261229226122923547936Salmonella typhimurium LT2, complete genomeputative hydrolase1e-175615
NC_016810:2943912:294518829451882946123936Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-175615
NC_016856:2896630:294284729428472943782936Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrolase1e-175615
NC_016857:2943912:294518829451882946123936Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative hydrolase1e-175615
NC_016860:2917910:294617829461782947113936Salmonella enterica subsp. enterica serovar Typhimurium strIroE1e-175615
NC_016863:2844883:289110028911002892035936Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative hydrolase1e-175615
NC_017046:2943929:294392929439292944864936Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-175615
NC_006905:2857699:287729728772972878232936Salmonella enterica subsp. enterica serovar Choleraesuis strIroE3e-175613
NC_012125:2826624:285782928578292858764936Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-174612
NC_011274:2793355:279839827983982799327930Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-174611
NC_010067:171053:185128185128186075948Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-149527
NC_011747:86000:102058102058103014957Escherichia coli S88 plasmid pECOS88, complete sequenceIroE, putative hydrolase5e-101367
NC_016612:5208936:522515952251595226088930Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-83307
NC_020064:3609844:364670036467003647626927Serratia marcescens FGI94, complete genomeputative hydrolase of alpha/beta superfamily2e-43176
NC_017986:3283433:328443532844353285328894Pseudomonas putida ND6 chromosome, complete genomeesterase2e-39162
NC_020211:4484817:449663344966334497547915Serratia marcescens WW4, complete genomeesterase8e-35147
NC_009524:1796000:181389318138931814882990Psychrobacter sp. PRwf-1 chromosome, complete genomealpha/beta fold family hydrolase-like protein4e-24112
NC_009937:3748885:375190337519033752757855Azorhizobium caulinodans ORS 571, complete genomeputative esterase4e-1789
NC_017501:1913360:192949019294901930422933Neisseria meningitidis 8013, complete genomehypothetical protein3e-1685.9
NC_017517:1915842:193143019314301932362933Neisseria meningitidis M01-240355 chromosome, complete genomeesterase family protein3e-1685.9
NC_013016:354000:358920358920359852933Neisseria meningitidis alpha14 chromosome, complete genomeputative esterase2e-1583.6
NC_020211:996497:102886310288631029642780Serratia marcescens WW4, complete genomehypothetical protein7e-1168.2
NC_009715:167513:169240169240169935696Campylobacter curvus 525.92 chromosome, complete genome30S ribosomal protein S121e-0653.9