Pre_GI: BLASTP Hits

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Query: NC_004631:2584244:2594440 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2594440, End: 2594769, Length: 330

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:378844:386344386344386673330Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-59225
NC_010102:2721374:273162827316282732128501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-41167
NC_011080:383441:390770390770391270501Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-41167
NC_011083:403022:433437433437433937501Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-41167
NC_011147:2463299:247348424734842473984501Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-41167
NC_011294:346915:365614365614366114501Salmonella enterica subsp. enterica serovar Enteritidis strexported protein2e-41167
NC_016831:2627515:263776726377672638267501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-41167
NC_006905:401154:430849430849431349501Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein2e-41167
NC_012125:373630:380959380959381459501Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic protein2e-41167
NC_016810:366908:385794385794386294501Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-41167
NC_016856:365665:387001387001387501501Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-41167
NC_016863:367404:386290386290386790501Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-41167
NC_017046:366905:385791385791386291501Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-41167
NC_011094:380428:399080399080399580501Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-41167
NC_006511:2467763:247794824779482478448501Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-41167
NC_011149:361765:369094369094369594501Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-41166
NC_016832:2581145:259134125913412591544204Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-32137
NC_011083:403022:436627436627437115489Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein2e-1891.3
NC_011080:383441:393960393960394448489Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein2e-1891.3
NC_011149:361765:372295372295372783489Salmonella enterica subsp. enterica serovar Agona str. SL483,putative inner membrane protein2e-1891.3
NC_011094:380428:402283402283402771489Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1891.3
NC_010102:2721374:272844827284482728936489Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1891.3
NC_011274:376970:387488387488387976489Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1890.5
NC_016831:2627515:263458726345872635075489Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1890.5
NC_006511:2467763:247470724747072475256550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-1889.7
NC_011147:2463299:247030424703042470792489Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-1889.7
NC_012125:373630:384149384149384637489Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1788.2
NC_016832:2581145:258809125880912588639549Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1168.6
NC_003198:378844:389375389375389923549Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1168.6
NC_004631:2584244:259119025911902591738549Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-1168.6