Pre_GI: BLASTP Hits

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Query: NC_004631:2584244:2588886 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2588886, End: 2589245, Length: 360

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:378844:391868391868392227360Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable lipoprotein5e-65245
NC_011083:403022:439093439093439476384Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cytochrome c type biogenesis protein CycH5e-64242
NC_011149:361765:374763374763375146384Salmonella enterica subsp. enterica serovar Agona str. SL483,cytochrome c type biogenesis protein CycH5e-64242
NC_011080:383441:396426396426396809384Salmonella enterica subsp. enterica serovar Newport str. SL254,cytochrome c type biogenesis protein CycH5e-64242
NC_006511:2467763:247240624724062472765360Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable lipoprotein5e-64242
NC_010102:2721374:272608527260852726444360Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-64242
NC_011147:2463299:246794224679422468301360Salmonella enterica subsp. enterica serovar Paratyphi A strlipoprotein5e-64242
NC_012125:373630:386639386639386998360Salmonella enterica subsp. enterica serovar Paratyphi C strainlipoprotein5e-64242
NC_011274:376970:389978389978390337360Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91lipoprotein1e-63241
NC_016832:2581145:258578725857872586056270Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome c type biogenesis protein CycH8e-47185
NC_009648:293052:306218306218306574357Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein6e-46182
NC_016831:2627515:263222626322262632495270Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative lipoprotein8e-46181
NC_020063:2343813:235671023567102357069360Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-44177
NC_011745:4862218:489145748914574891810354Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-1062.8
NC_016612:1840325:184620718462071846560354Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-0959.3
NC_007712:532500:553655553655554023369Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-0958.9
NC_015663:1934863:193663719366371936990354Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein9e-0958.9
NC_020181:3518396:353421235342123534565354Enterobacter aerogenes EA1509E, complete genomeprobable membrane protein yjeI9e-0958.9
NC_013508:343617:370598370598370945348Edwardsiella tarda EIB202, complete genomehypothetical protein2e-0857.8
NC_016845:411844:417867417867418220354Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative lipoprotein5e-0856.6
NC_011283:5170683:518731651873165187669354Klebsiella pneumoniae 342 chromosome, complete genomelipoprotein5e-0856.6
NC_013850:4993307:500937550093755009728354Klebsiella variicola At-22 chromosome, complete genomehypothetical protein5e-0856.6
NC_012731:403670:409680409680410045366Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-0856.2
NC_009648:4958500:496455149645514964916366Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein5e-0856.2