Pre_GI: BLASTP Hits

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Query: NC_004631:25807:34511 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 34511, End: 34816, Length: 306

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:25807:345113451134816306Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transcriptional regulator6e-54209
NC_003198:25807:345113451134816306Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator6e-54209
NC_011080:25751:343693436934809441Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-48190
NC_016810:25803:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-48190
NC_016856:25803:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator3e-48190
NC_016857:25803:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator3e-48190
NC_016860:25758:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator3e-48190
NC_016863:25804:343773437734817441Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator3e-48190
NC_011205:25805:343773437734817441Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator2e-48190
NC_011274:25692:342643426434704441Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-48190
NC_011149:25760:343783437834815438Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transcription regulator2e-48190
NC_011094:25762:343803438034817438Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator2e-48190
NC_011147:25836:344093440934846438Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator2e-48190
NC_006511:25796:343693436934806438Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcription regulator2e-48190
NC_016831:25760:343773437734817441Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-48190
NC_011294:25569:341333413334573441Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-48190
NC_017046:25758:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-48188
NC_003197:25803:343763437634816441Salmonella typhimurium LT2, complete genomeputative transcriptional regulator1e-47187
NC_010067:2881448:289265828926582893089432Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-45179
NC_016612:2223357:223653822365382236981444Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-22104
NC_010067:2881448:289446828944682894917450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1994
NC_011149:25760:325473254732996450Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-1993.6
NC_011080:25751:325383253832987450Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein4e-1993.6
NC_004631:25807:325493254932998450Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-1993.6
NC_003198:25807:325493254932998450Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-1993.6
NC_011205:25805:325463254632995450Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-1993.6
NC_011274:25692:324333243332882450Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-1993.6
NC_011294:25569:323103231032759450Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-1993.6
NC_016831:25760:325463254632995450Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1993.6
NC_016832:25807:325493254932998450Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1993.6
NC_003197:25803:325453254532994450Salmonella typhimurium LT2, complete genomeputative transcriptional regulator4e-1993.2
NC_016810:25803:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1993.2
NC_016856:25803:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator4e-1993.2
NC_016857:25803:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator4e-1993.2
NC_016860:25758:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator4e-1993.2
NC_016863:25804:325463254632995450Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator4e-1993.2
NC_017046:25758:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-1993.2
NC_011147:25836:325783257833027450Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-1992.8
NC_006511:25796:325383253832987450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-1992.8
NC_011094:25762:325493254932998450Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-1992.4
NC_010102:25893:326333263333082450Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1890.1