Pre_GI: BLASTP Hits

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Query: NC_004631:1842050:1843504 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1843504, End: 1844058, Length: 555

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1164176:118306211830621183616555Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-104375
NC_011080:1209935:122863612286361229190555Salmonella enterica subsp. enterica serovar Newport str. SL254,chaperone, TorD family9e-104375
NC_006905:1186895:120693512069351207489555Salmonella enterica subsp. enterica serovar Choleraesuis strparal putative oxidoreductase component9e-104375
NC_003197:1207597:122684912268491227403555Salmonella typhimurium LT2, complete genomeputative oxidoreductase component9e-104375
NC_006511:1770000:177147317714731772027555Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein9e-104375
NC_003198:1117687:113712511371251137679555Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein9e-104375
NC_011083:1216500:123119812311981231752555Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,chaperone, TorD family9e-104375
NC_011147:1763681:176665617666561767210555Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-104375
NC_011205:2137696:213959421395942140148555Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853chaperone, TorD family9e-104375
NC_011294:2009388:201128620112862011840555Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-104375
NC_016863:1165232:118430211843021184856555Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative oxidoreductase9e-104375
NC_016860:1205282:122453512245351225089555Salmonella enterica subsp. enterica serovar Typhimurium strchaperone, TorD family protein9e-104375
NC_016857:1163919:118298911829891183543555Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative oxidoreductase9e-104375
NC_016856:1165941:118501111850111185565555Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative oxidoreductase9e-104375
NC_016832:1838220:184053918405391841093555Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-104375
NC_016810:1163919:118298911829891183543555Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-104375
NC_012125:2646792:264824626482462648800555Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-104375
NC_011094:1166271:118515611851561185710555Salmonella enterica subsp. enterica serovar Schwarzengrund strchaperone, TorD family protein2e-103374
NC_010102:1979742:198120019812001981751552Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-103372
NC_010067:1782998:178443417844341784988555Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-101367
NC_000913:1087062:109886310988631099417555Escherichia coli K12, complete genomehypothetical protein2e-92337
AC_000091:1083798:109988110998811100435555Escherichia coli W3110 DNA, complete genomehypothetical protein2e-92337
NC_010468:2809125:280971828097182810272555Escherichia coli ATCC 8739, complete genomecytoplasmic chaperone TorD family protein2e-92337
NC_013716:1178383:119704111970411197595555Citrobacter rodentium ICC168, complete genomeputative chaperone1e-91335
NC_011274:2044000:204403220440322044529498Salmonella enterica subsp. enterica serovar Gallinarum str. 287/912e-91334
NC_008258:1076922:109390110939011094455555Shigella flexneri 5 str. 8401, complete genomeputative oxidoreductase component2e-91334
NC_004337:1065609:107452110745211075075555Shigella flexneri 2a str. 301, complete genomeputative oxidoreductase component2e-90330
NC_015968:1709680:171495817149581715512555Enterobacter asburiae LF7a chromosome, complete genomecytoplasmic chaperone TorD family protein9e-88322
NC_014121:2629075:264489726448972645451555Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecytoplasmic chaperone TorD family protein6e-85313
NC_016514:1701273:170476517047651705319555Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcdY4e-85313
NC_015663:3466471:350106435010643501618555Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative oxidoreductase component1e-83308
NC_016816:2782373:278825527882552788824570Pantoea ananatis LMG 5342, complete genomecytoplasmic chaperone TorD family protein2e-68257
NC_017047:1796000:181141618114161812000585Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein4e-67253
NC_009778:2227627:223627422362742236840567Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-67253
NC_010465:2383219:240234324023432402903561Yersinia pseudotuberculosis YPIII, complete genomecytoplasmic chaperone TorD family protein1e-66252
NC_010159:2546590:256560625656062566166561Yersinia pestis Angola, complete genomecytoplasmic chaperone, TorD family1e-66252
NC_004088:2491303:251047425104742511034561Yersinia pestis KIM, complete genomeoxidoreductase component1e-66252
NC_009381:1205900:122498712249871225547561Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-66252
NC_009708:2347350:236523923652392365799561Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeTorD family cytoplasmic chaperone1e-66252
NC_014029:2285323:230446223044622305022561Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-66252
NC_017160:2212806:223196122319612232521561Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-66252
NC_017168:3433804:345277034527703453330561Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-66252
NC_017265:2213500:223213822321382232698561Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-66252
NC_010278:398521:404403404403404972570Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,component of anaerobic dehydrogenase3e-30131
NC_010939:405477:427285427285427854570Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein3e-30131
NC_009053:393700:399573399573400142570Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-30131
NC_013416:1588369:159788915978891598452564Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTorD protein8e-29126
NC_016513:1924242:193381919338191934382564Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeTorD protein8e-29126
NC_009831:1539159:155485015548501555464615Shewanella sediminis HAW-EB3, complete genomecytoplasmic chaperone TorD family protein1e-0962.8
NC_011147:4297513:430330043033004304004705Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0962.4
NC_004631:4381724:438546243854624386148687Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0962.4
NC_003198:4397074:440081244008124401498687Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0962.4
NC_016832:4368948:437277943727794373372594Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxidoreductase component2e-0962
NC_016831:4367000:437110143711014371694594Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-0961.2
NC_011080:4543000:454691045469104547503594Salmonella enterica subsp. enterica serovar Newport str. SL254,oxidoreductase component4e-0961.2
NC_012125:4481808:448571944857194486312594Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0961.2
NC_011294:4409137:441298744129874413640654Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-0961.2
NC_011274:4385039:439089543908954391548654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-0961.2
NC_006905:4486433:449028444902844490937654Salmonella enterica subsp. enterica serovar Choleraesuis strputative component of anaerobic dehydrogenase3e-0961.2
NC_011149:4474012:447792344779234478516594Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-0960.8
NC_010102:4477836:448174744817474482340594Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0960.8
NC_016860:4649274:465318546531854653778594Salmonella enterica subsp. enterica serovar Typhimurium strputative anaerobic dehydrogenase component5e-0960.8
NC_017046:4571833:457574445757444576337594Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-0960.8
NC_003197:4551880:455573145557314556384654Salmonella typhimurium LT2, complete genomeputative anaerobic dehydrogenase component4e-0960.8
NC_016810:4573172:457702345770234577676654Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-0960.8
NC_016856:4563435:456927345692734569926654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative anaerobic dehydrogenase component4e-0960.8
NC_016857:4573173:457702445770244577677654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative anaerobic dehydrogenase component4e-0960.8
NC_016863:4513106:451687945168794517532654Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative anaerobic dehydrogenase component4e-0960.8
NC_011094:4442478:444632944463294446982654Salmonella enterica subsp. enterica serovar Schwarzengrund stroxidoreductase9e-0960.1
NC_011083:4547825:455173645517364552329594Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-0859.7
NC_015061:1598920:159984715998471600455609Rahnella sp. Y9602 chromosome, complete genomecytoplasmic chaperone TorD family protein2e-0858.9
NC_017047:1551836:155276315527631553371609Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein2e-0858.9
NC_011205:4564645:457054345705434571136594Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-0858.5
NC_016818:1605918:160684516068451607453609Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative component of anaerobic dehydrogenase4e-0857.8
NC_010939:1920781:192932819293281929933606Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein2e-0755.1
NC_012962:1827000:182919018291901829786597Photorhabdus asymbiotica, complete genometwin-arginine leader-binding protein dmsd3e-0651.6
NC_009053:1895485:190402719040271904632606Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-0651.2