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Query: NC_004631:1623511:1644478 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1644478, End: 1645206, Length: 729

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1709578:173053717305371731265729Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-139495
NC_016863:1711832:173197017319701732698729Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1murein peptide amidase A1e-139495
NC_016860:1752000:177149117714911772219729Salmonella enterica subsp. enterica serovar Typhimurium strmurein peptide amidase A1e-139495
NC_016857:1709695:173065417306541731382729Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74murein peptide amidase A1e-139495
NC_016856:1763640:178377817837781784506729Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smurein peptide amidase A1e-139495
NC_016810:1709695:173065417306541731382729Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-139495
NC_003197:1753663:177380017738001774528729Salmonella typhimurium LT2, complete genomeputative carboxypeptidase1e-139495
NC_011094:1726000:174697517469751747703729Salmonella enterica subsp. enterica serovar Schwarzengrund strmurein peptide amidase A9e-139492
NC_011080:1750000:177015617701561770884729Salmonella enterica subsp. enterica serovar Newport str. SL254,peptidase, M14C family1e-138491
NC_006905:1766000:178693417869341787662729Salmonella enterica subsp. enterica serovar Choleraesuis strputative carboxypeptidase3e-138490
NC_009792:1345500:135814813581481358876729Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-129460
NC_021066:1778000:179181817918181792531714Raoultella ornithinolytica B6, complete genomemurein peptide amidase A9e-112402
NC_020181:969599:971164971164971877714Enterobacter aerogenes EA1509E, complete genomeGamma-D-Glutamyl-meso-Diaminopimelate Amidase7e-111399
NC_015663:4447984:446522744652274465940714Enterobacter aerogenes KCTC 2190 chromosome, complete genomemurein peptide amidase A1e-110399
NC_012731:2261787:226448122644812265188708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomemurein peptide amidase A1e-107389
NC_012917:2641000:266156426615642662283720Pectobacterium carotovorum subsp. carotovorum PC1, complete genomepeptidase M14 carboxypeptidase A3e-91334
NC_008800:2298000:231326323132632313970708Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,murein peptide amidase A6e-90330
NC_009784:2129069:213287121328712133617747Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein2e-66251