Pre_GI: BLASTP Hits

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Query: NC_004631:1587000:1604119 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1604119, End: 1604442, Length: 324

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1670112:169348416934841693807324Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-45180
NC_017046:1669995:169336716933671693636270Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-44177
NC_013892:2332319:235292623529262353246321Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-1993.2
NC_016860:1710950:173432217343221734645324Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-45180
NC_011094:1683979:170737217073721707695324Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-45180
NC_013508:1862896:187964318796431879969327Edwardsiella tarda EIB202, complete genomehypothetical protein9e-26115
NC_015740:2966184:296618429661842966528345Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-1167.8
NC_016863:1671428:169480016948001695123324Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-45180
NC_016810:1670112:169348416934841693807324Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-45180
NC_016514:2079975:210332621033262103643318Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-31134
NC_015723:1347946:135740213574021357725324Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein2e-1477.4
NC_016832:1582273:160106916010691601392324Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-46182
NC_016831:1468691:149206614920661492389324Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-45180
NC_008563:1505405:153229215322921532693402Escherichia coli APEC O1, complete genomehypothetical protein6e-35145
NC_018691:3496420:349997034999703500296327Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein UCP0255604e-1683.6
NC_006905:1726416:174978717497871750110324Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein2e-45180
NC_011080:1709612:173298417329841733307324Salmonella enterica subsp. enterica serovar Newport str. SL254,YdbL2e-45180
NC_011149:1429523:147019814701981470521324Salmonella enterica subsp. enterica serovar Agona str. SL483,YdbL2e-45180
NC_011083:1761352:178473417847341785057324Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,YdbL2e-45180