Pre_GI: BLASTP Hits

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Query: NC_004631:1587000:1597958 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1597958, End: 1598758, Length: 801

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1582273:159490815949081595708801Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-155548
NC_003198:1378457:138242313824231383223801Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-155548
NC_011149:1429523:147588214758821476682801Salmonella enterica subsp. enterica serovar Agona str. SL483,protein YdcF2e-155548
NC_012125:2143246:214721221472122148012801Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-155546
NC_011294:1493849:149781514978151498615801Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-155546
NC_011205:1633353:163733716373371638137801Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-155546
NC_011080:1709612:172682317268231727623801Salmonella enterica subsp. enterica serovar Newport str. SL254,protein YdcF2e-154544
NC_010102:1388344:139229513922951393095801Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-154543
NC_011274:1544653:154861915486191549419801Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-154543
NC_011094:1683979:170121017012101702010801Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-154543
NC_016831:1468691:148590514859051486705801Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein8e-154542
NC_006905:1726416:174362617436261744426801Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein5e-153540
NC_003197:1713259:173047017304701731270801Salmonella typhimurium LT2, complete genomeputative inner membrane protein9e-153539
NC_011083:1761352:177857317785731779373801Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein YdcF9e-153539
NC_016810:1670112:168732316873231688123801Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-153539
NC_016856:1723236:174044717404471741247801Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein9e-153539
NC_016857:1670112:168732316873231688123801Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein9e-153539
NC_016860:1710950:172816117281611728961801Salmonella enterica subsp. enterica serovar Typhimurium strprotein YdcF9e-153539
NC_016863:1671428:168863916886391689439801Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein9e-153539
NC_017046:1669995:168720616872061688006801Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-153539
NC_010067:1300606:130459013045901305390801Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-151533
NC_015761:1599000:161350316135031614303801Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-132471
NC_020181:1057476:106002910600291060820792Enterobacter aerogenes EA1509E, complete genomeProtein ydcF4e-72271
NC_015663:4347187:436231843623184363109792Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein6e-72270
NC_020291:552104:553009553009553794786Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein1e-42173
NC_014727:1071773:107401810740181074791774Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein2e-22105