Pre_GI: BLASTP Hits

Some Help

Query: NC_004631:1091303:1109520 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1109520, End: 1110959, Length: 1440

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1090274:1108492110849211100331542Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,RNA methylase, NOL1/NOP2/sun0992
NC_003198:1867456:1870173187017318716121440Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0991
NC_016857:1903426:1906041190604119075821542Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74ribosomal RNA small subunit methyltransferase F0986
NC_016860:1943203:1945818194581819473591542Salmonella enterica subsp. enterica serovar Typhimurium str16S rRNA methyltransferase F0986
NC_003197:1945858:1948575194857519500141440Salmonella typhimurium LT2, complete genomeputative rRNA methyltransferase0986
NC_016810:1903426:1906143190614319075821440Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0986
NC_016856:1957263:1959980195998019614191440Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SrRNA (cytosine-C(5)-)-methyltransferase RsmF0986
NC_016863:1905454:1908171190817119096101440Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1rRNA (cytosine-C(5)-)-methyltransferase RsmF0986
NC_017046:1902788:1905505190550519069441440Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0986
NC_011080:1944226:1946841194684119483821542Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal RNA small subunit methyltransferase F0984
NC_006905:1961774:1964425196442519659661542Salmonella enterica subsp. enterica serovar Choleraesuis strparal putative rRNA methyltransferase0984
NC_011094:1923870:1926485192648519280261542Salmonella enterica subsp. enterica serovar Schwarzengrund strrRNA (cytosine-C(5)-)-methyltransferase RsmF0983
NC_011083:1993672:1996281199628119978221542Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal RNA small subunit methyltransferase F0982
NC_011205:1391971:1417690141769014191291440Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853rRNA (cytosine-C(5)-)-methyltransferase RsmF0982
NC_016831:1690811:1693420169342016949611542Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0982
NC_011149:1236689:1250618125061812520571440Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal RNA small subunit methyltransferase F0972
NC_014837:2458780:2462713246271324641311419Pantoea sp. At-9b chromosome, complete genomeRNA methylase, NOL1/NOP2/sun family0672
NC_013421:2306000:2322608232260823240621455Pectobacterium wasabiae WPP163, complete genomeRNA methylase, NOL1/NOP2/sun family0641
NC_016602:2037162:2037162203716220385861425Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceribosomal RNA small subunit methyltransferase F5e-161567
NC_010506:2441944:2442928244292824443641437Shewanella woodyi ATCC 51908, complete genomeRNA methylase, NOL1/NOP2/sun family7e-133474
NC_015555:430054:4478264478264491931368Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA methylase, NOL1/NOP2/sun family1e-54214
NC_014410:525645:5426745426745440741401Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,RNA methylase, NOL1/NOP2/sun family4e-52206
NC_019970:510632:5297345297345311341401Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeNOL1/NOP2/sun family putative RNA methylase1e-50201
NC_015565:2827444:2827444282744428287901347Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeRNA methylase, NOL1/NOP2/sun family2e-48194
NC_004663:2509433:2564143256414325656211479Bacteroides thetaiotaomicron VPI-5482, complete genometRNA and rRNA cytosine-C5-methylase1e-44181
NC_000868:571500:590832590832591767936Pyrococcus abyssi GE5, complete genomeproliferating-cell nucleolar antigen P120, putative1e-44181
NC_003413:1448377:145014514501451451080936Pyrococcus furiosus DSM 3638, complete genomeputative nol1-nop2-sun family nucleolar protein I1e-43178
NC_015474:105075:106838106838107773936Pyrococcus sp. NA2 chromosome, complete genomenucleolar protein2e-43177
NC_014836:2848000:284859628485962849546951Desulfurispirillum indicum S5 chromosome, complete genomeRNA methylase, NOL1/NOP2/sun family4e-42172
NC_000961:1366000:136648413664841367422939Pyrococcus horikoshii OT3, complete genomenucleolar protein2e-41171
NC_013730:7118798:7132157713215771335181362Spirosoma linguale DSM 74, complete genomeFmu (Sun) domain protein2e-41170
NC_014727:1071773:1084937108493710863611425Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,tRNA and rRNA cytosine-c5-methylase3e-39163
NC_015416:2785514:280366628036662804571906Methanosaeta concilii GP-6 chromosome, complete genomeNOL1/NOP2/sun family putative RNA methylase5e-39162
NC_014221:1167261:1185691118569111870911401Truepera radiovictrix DSM 17093 chromosome, complete genomeFmu (Sun) domain protein2e-38160
NC_015277:689519:7063527063527077071356Sphingobacterium sp. 21 chromosome, complete genomeFmu (Sun) domain protein4e-36152
NC_009012:686740:6981636981636995301368Clostridium thermocellum ATCC 27405, complete genomesun protein8e-36151
NC_015931:134601:1819411819411829841044Pyrolobus fumarii 1A, complete genomeNOL1/NOP2/sun family RNA methylase2e-33144
NC_014761:1588755:1604964160496416063161353Oceanithermus profundus DSM 14977 chromosome, complete genomefmu (sun) domain protein2e-32140
NC_020134:2237421:2243462224346222448111350Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosomal RNA small subunit methyltransferase B3e-32140
NC_014122:773825:788306788306789130825Methanocaldococcus infernus ME chromosome, complete genomeRNA methylase, NOL1/NOP2/sun family1e-31137
NC_014374:193391:1946531946531956601008Acidilobus saccharovorans 345-15 chromosome, complete genomeRNA (Cytosine-C(5)-)-methyltransferase2e-29130
NC_015680:21500:2275922759241111353Pyrococcus yayanosii CH1 chromosome, complete genomesun protein (fmu protein)5e-29129
NC_016051:1681076:1682087168208716832561170Thermococcus sp. AM4 chromosome, complete genometRNA/RNA cytosine-C5-methylase5e-29129
NC_002570:2616899:2625642262564226269941353Bacillus halodurans C-125, complete genomehypothetical protein2e-28127
NC_014657:944000:9456989456989469691272Caldicellulosiruptor owensensis OL chromosome, complete genomesun protein3e-28126
NC_000868:1730820:1753260175326017544171158Pyrococcus abyssi GE5, complete genomeproliferating-cell nucleolar antigen P120, putative3e-27123
NC_012804:271459:2743742743742755431170Thermococcus gammatolerans EJ3, complete genometRNA/rRNA cytosine-C5-methylase, putative3e-27123
NC_015636:1603664:162263716226371623470834Methanothermococcus okinawensis IH1 chromosome, complete genomeRNA methylase, NOL1/NOP2/sun family5e-27122
NC_007626:4135961:4165793416579341670791287Magnetospirillum magneticum AMB-1, complete genometRNA and rRNA cytosine-C5-methylase2e-25117
NC_015474:723553:7402247402247413901167Pyrococcus sp. NA2 chromosome, complete genomenol1-nop2-sun family nucleolar protein III5e-25115
NC_015873:1901939:1926015192601519273551341Megasphaera elsdenii DSM 20460, complete genomeribosomal RNA small subunit methyltransferase B7e-25115
NC_000961:1727638:1729353172935317305221170Pyrococcus horikoshii OT3, complete genomenucleolar protein1e-24115
NC_017030:2299592:2318622231862223198151194Corallococcus coralloides DSM 2259 chromosome, complete genomeRsmB/NOP family methyltransferase1e-24114
NC_015422:3836911:3857586385758638589051320Alicycliphilus denitrificans K601 chromosome, complete genomeFmu (Sun) domain-containing protein4e-24113
NC_007929:653814:6571566571566584931338Lactobacillus salivarius subsp. salivarius UCC118, complete genome16S rRNA m(5)C 967 methyltransferase1e-23111
NC_009004:2055563:2061936206193620632101275Lactococcus lactis subsp. cremoris MG1363, complete genomeRibosomal RNA small subunit methyltransferase B4e-23109
NC_014623:3238996:325318332531833254151969Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemethyltransferase7e-23108
NC_017030:6878319:6894655689465568960191365Corallococcus coralloides DSM 2259 chromosome, complete genomeRsmB/NOP family methyltransferase8e-23108
NC_000853:1480478:1508256150825615095511296Thermotoga maritima MSB8, complete genomesun protein1e-22108
NC_010511:1074557:1091049109104910923621314Methylobacterium sp. 4-46 chromosome, complete genomeFmu (Sun) domain-containing protein1e-22108
NC_003551:260000:2838412838412851901350Methanopyrus kandleri AV19, complete genometRNA/rRNA cytosine-C5-methylase5e-22106
NC_013355:1332263:1350191135019113515971407Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeFmu (Sun) domain protein6e-22105
NC_014010:2689682:2691278269127826926241347Candidatus Puniceispirillum marinum IMCC1322 chromosome, completetRNA/rRNA cytosine-C5-methylase6e-22105
NC_005070:1588419:1615831161583116171561326Synechococcus sp. WH 8102, complete genomeSun protein (Fmu protein)5e-21102
NC_009482:485238:5083905083905097541365Synechococcus sp. RCC307 chromosome, complete genomeribosomal RNA small subunit methyltransferase B5e-21102
NC_008698:435885:4462084462084473771170Thermofilum pendens Hrk 5, complete genomeFmu (Sun) domain protein6e-21102
NC_020126:2687627:2692715269271526938601146Myxococcus stipitatus DSM 14675, complete genomeRsmB/NOP family methyltransferase2e-20101
NC_007513:1503955:1523760152376015250971338Synechococcus sp. CC9902, complete genomeFmu, rRNA SAM-dependent methyltransferase6e-2099.4
NC_005213:202400:268243268243269115873Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-1998.2
NC_015510:2487617:2500378250037825015831206Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeFmu (Sun) domain-containing protein2e-1997.4
NC_006511:3364448:3384847338484733861361290Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsun protein1e-1894.7
NC_008054:1194000:1213324121332412146401317Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative RNA methylase1e-1894.7
NC_008260:125500:1398591398591412021344Alcanivorax borkumensis SK2, complete genometRNA and rRNA cytosine-C5-methylase, putative2e-1894.4
NC_009256:3601080:3620213362021336216971485Burkholderia vietnamiensis G4 chromosome 1, complete sequencesun protein2e-1894.4
NC_009952:1680682:1708348170834817095261179Dinoroseobacter shibae DFL 12, complete genomerRNA (cytosine-C(5)-)-methyltransferase1e-1791.3
NC_013282:3962188:3980099398009939813761278Cronobacter turicensis, complete genomeRibosomal RNA small subunit methyltransferase B1e-1791.3
NC_020125:1853208:1873983187398318752451263Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-1790.9
NC_019892:2816549:2819255281925528204601206Singulisphaera acidiphila DSM 18658 chromosome, complete genometRNA/rRNA cytosine-C5-methylase3e-1790.1
CP002185:3627992:3648176364817636494651290Escherichia coli W, complete genome16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent5e-1789.7
NC_008818:702452:7060297060297072461218Hyperthermus butylicus DSM 5456, complete genomeribosomal RNA small subunit methyltransferase B4e-1789.7
NC_015677:3787419:3803052380305238044011350Ramlibacter tataouinensis TTB310 chromosome, complete genome16S rRNA m5C967 methyltransferase4e-1789.7
NC_002695:4153394:4170219417021941715081290Escherichia coli O157:H7 str. Sakai, complete genomeRNA methyltransferase4e-1789.7
NC_011035:1974489:1997612199761219988651254Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative 16S RNA methyltransferase8e-1789
NC_011145:306623:3246623246623259721311Anaeromyxobacter sp. K, complete genomeFmu (Sun) domain protein9e-1788.6
NC_009901:2427291:2429824242982424310411218Shewanella pealeana ATCC 700345, complete genomeFmu (Sun) domain protein9e-1788.6
NC_017511:1883663:1905876190587619071351260Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative 16S RNA methyltransferase9e-1788.6
NC_015379:89441:9039790397917071311Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Ribosomal RNA small subunit methyltransferase B1e-1688.2
NC_003551:723901:7297177297177307871071Methanopyrus kandleri AV19, complete genometRNA/rRNA cytosine-C5-methylase2e-1687.8
NC_016830:81382:8233882338836481311Pseudomonas fluorescens F113 chromosome, complete genomeprotein RsmB2e-1687.8
NC_015387:1278471:1284435128443512856881254Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeNusB/RsmB/TIM443e-1687
NC_008767:84950:1075971075971088561260Neisseria meningitidis FAM18, complete genomeSUN-family protein4e-1686.3
NC_017515:76861:1256581256581269171260Neisseria meningitidis M04-240196 chromosome, complete genomeribosomal RNA small subunit methyltransferase B5e-1686.3
NC_013016:2041890:2066556206655620678151260Neisseria meningitidis alpha14 chromosome, complete genomeSun protein5e-1686.3
NC_017517:98554:1211211211211223801260Neisseria meningitidis M01-240355 chromosome, complete genomeribosomal RNA small subunit methyltransferase B5e-1686.3
NC_017501:96211:1179651179651192241260Neisseria meningitidis 8013, complete genomeribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase; 16S rRNA m5C967 methyltransferase)5e-1686.3
NC_010120:2055803:2080472208047220817311260Neisseria meningitidis 053442, complete genome16S RNA methyltransferase5e-1686.3
NC_017505:96293:1182621182621195211260Neisseria meningitidis alpha710 chromosome, complete genomersmB 16S RNA methyltransferase5e-1685.9
NC_017518:98639:1206091206091218681260Neisseria meningitidis NZ-05/33 chromosome, complete genomeribosomal RNA small subunit methyltransferase B9e-1685.5
NC_003112:96815:1196201196201208791260Neisseria meningitidis MC58, complete genome16S RNA methyltransferase9e-1685.5
NC_017516:96879:1196841196841209431260Neisseria meningitidis H44/76 chromosome, complete genomeribosomal RNA small subunit methyltransferase B9e-1685.5
NC_007760:308500:3221393221393234521314Anaeromyxobacter dehalogenans 2CP-C, complete genomemethyltransferase7e-1685.5
NC_002967:2194829:219482921948292195620792Treponema denticola ATCC 35405, complete genomeNOL1/NOP2/sun family protein1e-1585.1
NC_017512:2116295:2140962214096221422211260Neisseria meningitidis WUE 2594, complete genomeribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase; 16S rRNA m5C967 methyltransferase)1e-1584.7
NC_009831:2884851:2909924290992429111831260Shewanella sediminis HAW-EB3, complete genomeFmu (Sun) domain protein3e-1584
NC_008319:635157:6524406524406537891350Synechococcus sp. CC9311, complete genomesun protein4e-1583.2
NC_010002:528529:5486465486465500341389Delftia acidovorans SPH-1, complete genomesun protein4e-1583.2
NC_011891:315182:3332113332113345241314Anaeromyxobacter dehalogenans 2CP-1, complete genomeFmu (Sun) domain protein7e-1582.4
NC_014206:2516000:254155025415502542080531Geobacillus sp. C56-T3 chromosome, complete genome1e-1482
NC_010410:11201:2744627446287501305Acinetobacter baumannii AYE, complete genome16S rRNA m5C967 SAM-dependent methyltransferase1e-1481.6
NC_013411:1941762:195034219503421950875534Geobacillus sp. Y412MC61, complete genomehypothetical protein1e-1481.6
NC_014761:1196669:1202499120249912037311233Oceanithermus profundus DSM 14977 chromosome, complete genomenusb/rsmb/tim442e-1481.3
NC_014910:465980:4874774874774888441368Alicycliphilus denitrificans BC chromosome, complete genomesun protein2e-1480.9
NC_016783:1313008:1330538133053813319951458Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein3e-1480.5
NC_007948:4646344:4684495468449546858321338Polaromonas sp. JS666, complete genomesun protein2e-1480.5
NC_014374:1013184:1025163102516310263111149Acidilobus saccharovorans 345-15 chromosome, complete genomeRNA (Cytosine-C(5)-)-methyltransferase4e-1480.1
NC_002935:1315019:1332549133254913340061458Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein3e-1480.1
NC_016782:1293452:1306239130623913076961458Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein3e-1480.1
NC_016785:1270295:1287825128782512892821458Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein3e-1480.1
NC_016786:1293421:1306208130620813076651458Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein3e-1480.1
NC_016799:1343020:1361694136169413631511458Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein3e-1480.1
NC_016800:1317276:1334806133480613362631458Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein3e-1480.1
NC_016801:1333860:1351369135136913528261458Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein3e-1480.1
NC_020209:4768500:4810007481000748113171311Pseudomonas poae RE*1-1-14, complete genome16S rRNA methyltransferase B4e-1479.7
NC_010611:3879190:3882326388232638836301305Acinetobacter baumannii ACICU, complete genometRNA and rRNA cytosine-C5-methylase5e-1479.3
NC_005071:288922:3088423088423101971356Prochlorococcus marinus str. MIT 9313, complete genomeSun protein (Fmu protein)6e-1479.3
NC_016787:1276983:1295658129565812971151458Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein8e-1479
NC_016790:1259356:1273037127303712744941458Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein8e-1479
NC_008820:1818695:1820678182067818220301353Prochlorococcus marinus str. MIT 9303, complete genomeSun protein (Fmu protein)9e-1478.6
NC_016789:1334514:1352045135204513535021458Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein1e-1378.6
NC_014366:2703226:2709525270952527111621638Gamma proteobacterium HdN1, complete genomehypothetical protein2e-1377.4
NC_015931:618445:6389466389466402531308Pyrolobus fumarii 1A, complete genomeFmu (Sun) domain containing protein3e-1376.6
NC_007954:3171081:3172971317297131743651395Shewanella denitrificans OS217, complete genomeFmu (Sun)4e-1376.3
NC_015672:2236000:2237589223758922387101122Flexistipes sinusarabici DSM 4947 chromosome, complete genomeFmu (Sun) domain-containing protein5e-1376.3
NC_012588:1585808:1609748160974816107671020Sulfolobus islandicus M.14.25 chromosome, complete genomeFmu (Sun) domain-containing protein1e-1275.1
NC_012726:1611936:1635878163587816368971020Sulfolobus islandicus M.16.4 chromosome, complete genomeFmu (Sun) domain-containing protein1e-1275.1
NC_013769:1705500:1728911172891117299301020Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFmu (Sun) domain-containing protein1e-1275.1
NC_017275:1635959:1659959165995916609781020Sulfolobus islandicus HVE10/4 chromosome, complete genomeFmu (Sun) domain-containing protein1e-1275.1
NC_015435:537483:5562375562375572741038Metallosphaera cuprina Ar-4 chromosome, complete genomeFmu (Sun) domain-containing protein1e-1275.1
NC_012791:651480:6501716501716514991329Variovorax paradoxus S110 chromosome 1, complete genomesun protein5e-1169.7
NC_016885:2091918:2156490215649021576231134Pyrobaculum oguniense TE7 chromosome, complete genometRNA and rRNA cytosine-C5-methylase1e-0965.1
NC_009376:1:7015701581481134Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomePUA domain-containing protein3e-0963.9
NC_016070:637739:6394346394346405821149Thermoproteus tenax Kra 1, complete genometRNA and rRNA cytosine-C5-methylase3e-0963.5
NC_003364:402268:4137004137004148391140Pyrobaculum aerophilum str. IM2, complete genomeRNA binding protein (fmu, PCNA P120 homolog), probable7e-0962.4