Pre_GI: BLASTP Hits

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Query: NC_004631:1091303:1108864 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1108864, End: 1109055, Length: 192

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:2306000:232229223222922322483192Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF14821e-2098.2
NC_016818:3148000:316278731627873162978192Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein7e-1889.4
NC_017047:3212000:322686532268653227056192Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-1889.7
NC_015061:3147691:316226331622633162454192Rahnella sp. Y9602 chromosome, complete genomehypothetical protein5e-1889.7
NC_011149:1236689:124996212499621250096135Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1994.7
NC_006905:1961774:196643019664301966621192Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein2e-30130
NC_011205:1391971:141703414170341417168135Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-1994.7
NC_016831:1690811:169542616954261695617192Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-30130
NC_011083:1993672:199834419983441998478135Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1994.7
NC_011080:1944226:194890419489041949038135Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-1992.8
NC_011094:1923870:192849019284901928681192Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-30130
NC_003198:1867456:187207718720771872268192Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secreted protein2e-30130
NC_016832:1090274:110783611078361108027192Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-30130
NC_016810:1903426:190804719080471908238192Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-30129
NC_016860:1943203:194782419478241948015192Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane lipoprotein5e-30129
NC_016856:1957263:196188419618841962075192Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane lipoprotein5e-30129
NC_017046:1902788:190746619074661907600135Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-1992.8
NC_016857:1903426:190804719080471908238192Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane lipoprotein5e-30129
NC_016863:1905454:191007519100751910266192Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane lipoprotein5e-30129
NC_003197:1945858:195047919504791950670192Salmonella typhimurium LT2, complete genomeputative inner membrane lipoprotein5e-30129
NC_020064:2779864:279211427921142792305192Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1482)1e-2098.2