Pre_GI: BLASTP Hits

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Query: NC_004631:1091303:1104917 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1104917, End: 1105393, Length: 477

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1090274:110388911038891104365477Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-88323
NC_003198:1867456:187573918757391876215477Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-88323
NC_011205:1391971:141308714130871413563477Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-87319
NC_006905:1961774:197009119700911970567477Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein5e-87319
NC_011083:1993672:200195120019512002427477Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-86317
NC_011149:1236689:124601312460131246489477Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-86316
NC_011080:1944226:195249719524971952973477Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-86315
NC_011147:1057259:108153410815341082010477Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-86315
NC_003197:1945858:195414319541431954619477Salmonella typhimurium LT2, complete genomehypothetical protein2e-85313
NC_016810:1903426:191171119117111912187477Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-85313
NC_016831:1690811:169909116990911699567477Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-85313
NC_016856:1957263:196554819655481966024477Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-85313
NC_016857:1903426:191171119117111912187477Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-85313
NC_016860:1943203:195148819514881951964477Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-85313
NC_016863:1905454:191373919137391914215477Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-85313
NC_017046:1902788:191107319110731911549477Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-85313
NC_011094:1923870:193215319321531932629477Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-84309
NC_007712:1954808:195610819561081956554447Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1479
NC_012731:2083650:209641820964182096903486Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-0959.3