Pre_GI: BLASTP Hits

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Query: NC_004631:1091303:1103473 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1103473, End: 1103739, Length: 267

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1867456:187739318773931877659267Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-46183
NC_011147:1057259:108009910800991080368270Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-45179
NC_006511:1063249:108608910860891086358270Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-45179
NC_012125:1897611:192074419207441921013270Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-43173
NC_003197:1945858:195579619557961956065270Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-42169
NC_016856:1957263:196720119672011967470270Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein5e-42169
NC_016863:1905454:191539219153921915661270Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein5e-42169
NC_012779:1939747:194867619486761949458783Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1167
NC_007712:1516589:152667515266751527457783Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-1063.2
NC_007712:1219957:123223012322301232988759Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-0961.6
NC_007712:1791766:181320518132051813984780Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-0855.8
NC_007712:3067000:309322930932293094017789Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-0755.5