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Query: NC_004631:1091303:1098923 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1098923, End: 1099081, Length: 159

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1905454:192015019201501920308159Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein8e-22102
NC_003198:1867456:188205118820511882209159Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-22102
NC_011083:1993672:200837820083782008536159Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-22102
NC_011080:1944226:196556119655611965719159Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein8e-22102
NC_006511:1063249:108145610814561081614159Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-22102
NC_010102:1137247:115899311589931159151159Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-22102
NC_003197:1945858:196055419605541960712159Salmonella typhimurium LT2, complete genomeputative inner membrane protein8e-22102
NC_006905:1961774:197709619770961977254159Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein8e-22102
NC_011094:1923870:193743219374321937590159Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-22102
NC_011205:1391971:140701614070161407174159Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-22102
NC_016860:1943203:195789919578991958057159Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein8e-22102
NC_016857:1903426:191812219181221918280159Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein8e-22102
NC_016856:1957263:197195919719591972117159Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein8e-22102
NC_016831:1690811:170549417054941705652159Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative inner membrane protein8e-22102
NC_016810:1903426:191812219181221918280159Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein8e-22102
NC_011294:1220526:125507612550761255234159Salmonella enterica subsp. enterica serovar Enteritidis strinner membrane protein8e-22102
NC_011274:1299475:131926413192641319422159Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-22102
NC_017046:1902788:191749119174911917643153Salmonella enterica subsp. enterica serovar Typhimurium str. 798inner membrane protein1e-2098.6
NC_012125:1897611:191547219154721915624153Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-2098.6
NC_011147:1057259:107546610754661075588123Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1580.9
NC_005956:1616804:163067116306711630823153Bartonella henselae str. Houston-1, complete genomehypothetical protein5e-0856.6