Pre_GI: BLASTP Hits

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Query: NC_004631:1091303:1098299 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1098299, End: 1098913, Length: 615

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1867456:188221918822191882833615Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-90332
NC_011147:1057259:107484210748421075456615Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-89328
NC_006511:1063249:108083210808321081446615Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-89328
NC_003197:1945858:196072219607221961336615Salmonella typhimurium LT2, complete genomeputative inner membrane protein5e-89326
NC_011083:1993672:200854620085462009160615Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein5e-89326
NC_016810:1903426:191829019182901918904615Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-89326
NC_016856:1957263:197212719721271972741615Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein5e-89326
NC_016857:1903426:191829019182901918904615Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein5e-89326
NC_016860:1943203:195806719580671958681615Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein5e-89326
NC_016863:1905454:192031819203181920932615Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein5e-89326
NC_011094:1923870:193759419375941938214621Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-88325
NC_011080:1944226:196572319657231966343621Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein2e-88324
NC_011294:1220526:125445212544521255072621Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-88324
NC_011274:1299475:131864013186401319254615Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-88324
NC_016831:1690811:170566217056621706276615Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-88324
NC_012125:1897611:191484819148481915462615Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-88323
NC_006905:1961774:197726419772641977878615Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein4e-88323
NC_011205:1391971:140639214063921407006615Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853inner membrane protein7e-88322
NC_016832:1090274:109727010972701097668399Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-58223
NC_017046:1902788:191786919178691918267399Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-56218
NC_010102:1137247:115836911583691158767399Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-56218
NC_005956:1616804:163007916300791630660582Bartonella henselae str. Houston-1, complete genomehypothetical protein8e-41166
NC_010515:1618093:165010616501061650693588Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehypothetical protein8e-32136
NC_010512:866932:872989872989873576588Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein4e-30130