Pre_GI: BLASTP Hits

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Query: NC_004631:1091303:1091303 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1091303, End: 1092178, Length: 876

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1220526:122484312248431225718876Salmonella enterica subsp. enterica serovar Enteritidis strcation transporter5e-145513
NC_012125:1897611:190197719019771902801825Salmonella enterica subsp. enterica serovar Paratyphi C straincation transporter2e-135481
NC_011147:1057259:106157610615761062451876Salmonella enterica subsp. enterica serovar Paratyphi A strcation transporter3e-145514
NC_017046:1902788:192559719255971926421825Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter8e-134476
NC_013850:1887556:189186318918631892732870Klebsiella variicola At-22 chromosome, complete genomecopper resistance D domain protein4e-65248
NC_012912:2553391:256363625636362564511876Dickeya zeae Ech1591, complete genomecopper resistance D domain protein2e-37156
NC_010682:1913941:192672619267261927655930Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance D domain protein3e-0962.4
NC_016816:2073677:207716420771642078039876Pantoea ananatis LMG 5342, complete genomecopper resistance D domain-containing protein3e-44179
NC_015567:2039443:204600620460062046887882Serratia sp. AS9 chromosome, complete genomecopper resistance D domain-containing protein2e-39162
NC_010634:2004653:201331520133152014199885Yersinia pseudotuberculosis PB1/+, complete genomecopper resistance D domain-containing protein1e-35150
NC_015566:2039431:204599420459942046875882Serratia sp. AS12 chromosome, complete genomecopper resistance D domain-containing protein2e-39162
NC_015061:3111211:312989631298963130780885Rahnella sp. Y9602 chromosome, complete genomecopper resistance D domain-containing protein4e-37155
NC_011205:1345511:134982813498281350703876Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853copper resistance protein D6e-144510
NC_009659:892272:897993897993898925933Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein D5e-0858.5
NC_011080:1944226:197428719742871975162876Salmonella enterica subsp. enterica serovar Newport str. SL254,copper resistance protein D1e-144512
NC_011094:1923870:194722719472271948102876Salmonella enterica subsp. enterica serovar Schwarzengrund strcopper resistance protein D8e-144509
NC_010159:1668795:167550616755061676390885Yersinia pestis Angola, complete genomecopper resistance protein D1e-35150
NC_009659:1923925:195516619551661956086921Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein D3e-1169.3
NC_014640:1179382:119669911966991197625927Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein D4e-0652.4
NC_011083:1993672:201768720176872018562876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,copper resistance protein D5e-145513
NC_009138:1518315:153784815378481538768921Herminiimonas arsenicoxydans, complete genomeCopper resistance protein D1e-0757.4
NC_010102:1137247:114156411415641142439876Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-145513
NC_016832:1090274:109027410902741091149876Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inner membrane protein yebZ2e-146518
NC_006511:1063249:106756610675661068441876Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cation transporter3e-145514
NC_016860:1943203:196420719642071965082876Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter8e-144509
NC_003198:1908238:193430319343031935178876Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative cation transporter2e-146518
NC_016810:1903426:192623419262341927109876Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter8e-144509
NC_016818:3114460:313046431304643131348885Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative copper export protein3e-35149
NC_020064:2728569:275188427518842752765882Serratia marcescens FGI94, complete genomeputative copper export protein1e-32140
NC_017047:3174588:319449831944983195382885Rahnella aquatilis HX2 chromosome, complete genomeputative copper resistance protein D4e-37155
NC_016856:1957263:198007119800711980946876Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein8e-144509
NC_016857:1903426:192623419262341927109876Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein8e-144509
NC_003197:1945858:196866619686661969541876Salmonella typhimurium LT2, complete genomeputative inner membrane protein8e-144509
NC_016863:1905454:192826219282621929137876Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein8e-144509
NC_008258:1873805:188821218882121889084873Shigella flexneri 5 str. 8401, complete genomeputative resistance protein7e-93340