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Query: NC_004605:741000:753260 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 753260, End: 753709, Length: 450

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014966:638355:650101650101650562462Vibrio vulnificus MO6-24/O chromosome II, complete sequenceATPase with chaperone activity, associated with Flp pilus assembly9e-22102
NC_005140:660305:672123672123672584462Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-21101
NC_004460:81687:935819358193964384Vibrio vulnificus CMCP6 chromosome II, complete sequenceATPase with chaperone activity2e-2098.2