Pre_GI: BLASTP Hits

Some Help

Query: NC_004605:1385444:1406190 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 1406190, End: 1406597, Length: 408

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007608:97092:1168041168041182581455Shigella boydii Sb227 plasmid pSB4_227, complete sequenceOspC21e-0961.6
NC_010660:175200:1990601990602005141455Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceOspC21e-0961.6
NC_010660:86445:8802788027894811455Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceOspC35e-0650.1
NC_007607:87000:1173141173141187681455Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceOspC35e-0650.1
NC_015761:1970042:1980567198056719824561890Salmonella bongori NCTC 12419, complete genomevirulence protein8e-23105