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Query: NC_004603:2235142:2250066 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 2250066, End: 2250674, Length: 609

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015633:2801321:281113928111392811678540Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein3e-70264
NC_004603:370320:383963383963384502540Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein4e-68257
NC_014840:286767:299787299787300332546Pantoea sp. At-9b plasmid pPAT9B03, complete sequencehypothetical protein3e-52204
NC_010995:4338860:434804843480484348587540Cellvibrio japonicus Ueda107, complete genomehypothetical protein3e-50197
NC_015497:4683741:468896846889684689510543Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein6e-24110
NC_015577:3113907:314925831492583149800543Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein2e-2099
NC_015500:2112975:212680321268032127435633Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein1e-1996.3