Pre_GI: BLASTP Hits

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Query: NC_004603:1961432:1961432 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1961432, End: 1962031, Length: 600

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2258854:226042722604272261041615Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-62238
NC_008702:2378890:238283923828392383312474Azoarcus sp. BH72, complete genomeconserved hypothetical protein7e-32136
NC_013854:1686997:170721517072151707910696Azospirillum sp. B510, complete genomeuncharacterized Nudix hydrolase9e-28123
NC_014761:516981:529877529877530365489Oceanithermus profundus DSM 14977 chromosome, complete genomenudix hydrolase2e-1789
NC_014221:2188250:218978321897832190424642Truepera radiovictrix DSM 17093 chromosome, complete genomeNUDIX hydrolase7e-1787
NC_009495:1516000:153221415322141532837624Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepyrophosphatase, MutT/nudix family2e-1168.9
NC_010520:1586000:160518416051841605807624Clostridium botulinum A3 str. Loch Maree, complete genomepyrophosphatase, MutT/nudix family4e-1167.8
NC_010003:570643:585398585398586006609Petrotoga mobilis SJ95, complete genomeNUDIX hydrolase4e-1167.8
NC_016751:1776669:179875217987521799375624Marinitoga piezophila KA3 chromosome, complete genomeADP-ribose pyrophosphatase6e-1167.4
NC_014632:1514500:152867415286741529351678Ilyobacter polytropus DSM 2926 chromosome, complete genomeNUDIX hydrolase8e-1167
NC_003366:1091766:109176610917661092416651Clostridium perfringens str. 13, complete genomehypothetical protein8e-1063.5
NC_008261:1048515:104851510485151049165651Clostridium perfringens ATCC 13124, complete genomepyrophosphatase, MutT/nudix family8e-1063.5
NC_016943:4194002:423915542391554239769615Blastococcus saxobsidens DD2, complete genomeputative NUDIX hydrolase2e-0755.8
NC_016906:4562874:458113745811374581811675Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative NUDIX hydrolase4e-0754.7
NC_013171:1364464:138465813846581385248591Anaerococcus prevotii DSM 20548, complete genomeNUDIX hydrolase6e-0753.9
NC_009718:643200:656567656567657112546Fervidobacterium nodosum Rt17-B1, complete genomeNUDIX hydrolase8e-0650.4