Pre_GI: BLASTP Hits

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Query: NC_004603:1519904:1533464 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1533464, End: 1534588, Length: 1125

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014394:808734:8172488172488183811134Gallionella capsiferriformans ES-2 chromosome, complete genomemetal dependent phosphohydrolase2e-43176
NC_012968:2228943:2237056223705622381801125Methylotenera mobilis JLW8, complete genomemetal dependent phosphohydrolase2e-40166
NC_014394:93344:1039391039391050601122Gallionella capsiferriformans ES-2 chromosome, complete genomemetal dependent phosphohydrolase3e-29129
NC_015424:3112637:3156974315697431580981125Aeromonas veronii B565 chromosome, complete genomemetal-dependent phosphohydrolase, HD subdomain-containing protein6e-27121
NC_007503:1680513:1680513168051316823481836Carboxydothermus hydrogenoformans Z-2901, complete genomesensory box protein1e-1170.9
NC_014836:1180454:1191870119187011928981029Desulfurispirillum indicum S5 chromosome, complete genomeresponse regulator receiver9e-1168.2
NC_011653:1339868:1355432135543213567751344Thermosipho africanus TCF52B, complete genomeHD domain protein7e-1065.5
NC_011978:1046279:1064212106421210659091698Thermotoga neapolitana DSM 4359, complete genomeMetal dependent phosphohydrolase4e-0962.8
NC_014633:339181:3618673618673629281062Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemetal dependent phosphohydrolase7e-0962
NC_007404:2743877:2743877274387727449111035Thiobacillus denitrificans ATCC 25259, complete genomeMetal dependent phosphohydrolase, HD region1e-0758.2
NC_015520:330500:338483338483339046564Mahella australiensis 50-1 BON chromosome, complete genome1e-0757.8
NC_021184:3533500:354607935460793546939861Desulfotomaculum gibsoniae DSM 7213, complete genomeputative domain HDIG-containing protein1e-0757.8
NC_015958:57957:5795757957598551899Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeputative PAS/PAC sensor protein4e-0756.2
NC_010321:2256758:2273695227369522755931899Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeputative PAS/PAC sensor protein4e-0756.2
NC_014538:33718:3585635856377541899Thermoanaerobacter sp. X513 chromosome, complete genomeputative PAS/PAC sensor protein5e-0755.8
NC_010320:33814:3595235952378501899Thermoanaerobacter sp. X514 chromosome, complete genomeputative PAS/PAC sensor protein5e-0755.8
NC_011978:493800:4951624951624962711110Thermotoga neapolitana DSM 4359, complete genomeResponse regulator5e-0755.8
NC_012968:1945614:194811419481141949019906Methylotenera mobilis JLW8, complete genomemetal dependent phosphohydrolase6e-0755.5
NC_009718:1183816:1197888119788811996061719Fervidobacterium nodosum Rt17-B1, complete genomemetal dependent phosphohydrolase8e-0755.1
NC_007644:711476:7182737182737207832511Moorella thermoacetica ATCC 39073, complete genomeputative PAS/PAC sensor protein8e-0755.1
NC_007520:2391675:2399450239945024004961047Thiomicrospira crunogena XCL-2, complete genomeresponse regulator receiver (CheY-like) modulated metal dependent phosphohydrolase1e-0654.7
NC_009997:3583166:3583166358316635847071542Shewanella baltica OS195, complete genomeresponse regulator receiver modulated metal dependent phosphohydrolase1e-0654.7
NC_009665:3460906:3462726346272634642671542Shewanella baltica OS185 chromosome, complete genomeresponse regulator receiver modulated metal dependent phosphohydrolase1e-0654.7
NC_016901:3530248:3531606353160635331471542Shewanella baltica OS678 chromosome, complete genomeresponse regulator receiver modulated metal dependent phosphohydrolase1e-0654.7
NC_011663:1709003:1738747173874717402881542Shewanella baltica OS223 chromosome, complete genomeresponse regulator receiver modulated metal dependent phosphohydrolase1e-0654.7
NC_010424:448865:4576744576744602352562Candidatus Desulforudis audaxviator MP104C, complete genomediguanylate cyclase with PAS/PAC sensor1e-0654.7
NC_014958:2614399:2614399261439926174943096Deinococcus maricopensis DSM 21211 chromosome, complete genomeputative PAS/PAC sensor protein2e-0653.9
NC_018012:1076839:1101317110131711024471131Thiocystis violascens DSM 198 chromosome, complete genomeresponse regulator containing a CheY-like receiver domain and an HD-GYP domain2e-0653.5
NC_015707:1614598:1614598161459816164631866Thermotoga thermarum DSM 5069 chromosome, complete genomemetal dependent phosphohydrolase3e-0653.5
NC_015161:758929:7796047796047809831380Deinococcus proteolyticus MRP chromosome, complete genomemetal dependent phosphohydrolase with GAF sensor3e-0653.1
NC_020063:3352516:3375072337507233762921221Enterobacteriaceae bacterium strain FGI 57, complete genomeputative domain HDIG-containing protein6e-0652.4
NC_013216:4131563:4133631413363141350551425Desulfotomaculum acetoxidans DSM 771, complete genomediguanylate cyclase and metal dependent phosphohydrolase7e-0652