Pre_GI: BLASTP Hits

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Query: NC_004603:1519904:1522119 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1522119, End: 1524323, Length: 2205

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011744:1059600:1077047107704710783571311Vibrio splendidus LGP32 chromosome 2, complete genomehypothetical protein4e-82306
NC_011744:1059600:1073688107368810750101323Vibrio splendidus LGP32 chromosome 2, complete genomehypothetical protein1e-81304
NC_011185:37922:3901239012412432232Vibrio fischeri MJ11 plasmid pMJ100, complete sequencehypothetical protein2e-68261
NC_011744:1059600:1066847106684710686281782Vibrio splendidus LGP32 chromosome 2, complete genomehypothetical protein5e-55216
NC_011744:1059600:107108610710861071691606Vibrio splendidus LGP32 chromosome 2, complete genomehypothetical protein4e-54213
NC_012724:2547500:2560602256060225616511050Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein8e-28125
NC_015761:2982000:2991958299195829931121155Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-26121
NC_015761:2982000:298680429868042987643840Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-25117
NC_007517:306508:320790320790321503714Geobacter metallireducens GS-15, complete genomehypothetical protein2e-22108
NC_011744:1059600:106434410643441064634291Vibrio splendidus LGP32 chromosome 2, complete genomehypothetical protein2e-22108
NC_007645:7136956:718299071829907183451462Hahella chejuensis KCTC 2396, complete genomehypothetical protein6e-22106
NC_011989:2795811:280259928025992803573975Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein7e-2099.8
NC_007645:5801295:582175758217575822140384Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-1998.6
NC_012997:1689583:169384616938461694226381Teredinibacter turnerae T7901, complete genomehypothetical protein2e-1997.8
NC_018691:2288000:2290160229016022918031644Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein5e-1893.6
NC_008095:8698766:870751687075168708022507Myxococcus xanthus DK 1622, complete genomehypothetical protein4e-1790.5
NC_007645:4423507:442616344261634426624462Hahella chejuensis KCTC 2396, complete genomehypothetical protein7e-1789.7
NC_015711:2542051:255284525528452553309465Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein4e-1687.4
NC_015711:2008578:202138320213832021847465Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-1585.9
NC_009648:3476000:3482649348264934841001452Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-1584.3
NC_008095:2420066:243280624328062433192387Myxococcus xanthus DK 1622, complete genomehypothetical protein6e-1583.2
NC_020126:8885518:889730188973018897684384Myxococcus stipitatus DSM 14675, complete genomehypothetical protein8e-1479.7
NC_008570:1986466:1993544199354419948631320Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein7e-1376.3
NC_015062:130359:1527611527611542151455Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein2e-1274.7
NC_007510:943068:9506959506959521671473Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein3e-1067.8
NC_003305:693810:6922336922336938131581Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-0964.7
NC_010084:3115:1530915309168891581Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein4e-0963.9
NC_010804:52000:5941759417609971581Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein4e-0963.9
NC_011989:2795811:279905627990562799289234Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein2e-0862
NC_014311:2385666:239062523906252391011387Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-0758.5
NC_020126:2216926:222641822264182227365948Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-0758.5
NC_008390:1293823:1307685130768513093551671Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein2e-0758.2
NC_011000:1397611:1409910140991014110851176Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-0758.2
NC_008095:5377000:538348653834865384307822Myxococcus xanthus DK 1622, complete genomehypothetical protein6e-0757
NC_011000:2732330:2765810276581027675671758Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-0756.6
NC_020126:3479500:3488151348815134892151065Myxococcus stipitatus DSM 14675, complete genomehypothetical protein9e-0756.2
NC_020126:7451894:7463054746305474643041251Myxococcus stipitatus DSM 14675, complete genomehypothetical protein9e-0652.8