Pre_GI: BLASTP Hits

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Query: NC_004603:1464000:1468883 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1468883, End: 1469635, Length: 753

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015637:819233:837382837382838212831Vibrio anguillarum 775 chromosome chromosome II, complete sequenceintegral membrane protein2e-91335
NC_007517:1998342:199834219983421999088747Geobacter metallireducens GS-15, complete genomeIntegral membrane protein TerC2e-50199
NC_011146:2200142:223827622382762239028753Geobacter bemidjiensis Bem, complete genomeIntegral membrane protein TerC5e-49194
NC_009943:305854:310875310875311600726Candidatus Desulfococcus oleovorans Hxd3, complete genomeIntegral membrane protein TerC6e-47187
NC_021150:5019887:502537850253785026124747Azotobacter vinelandii CA6, complete genomeIntegral membrane protein TerC family1e-45182
NC_012560:5019900:502539150253915026137747Azotobacter vinelandii DJ, complete genomeIntegral membrane protein TerC family1e-45182
NC_012039:1399699:141580814158081416530723Campylobacter lari RM2100, complete genomeintegral membrane protein, TerC family5e-45181
NC_005126:4333767:433376743337674334480714Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-43176
NC_016513:1720006:173365417336541734379726Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeprotein YegH3e-43175
NC_014041:4517999:452120845212084521915708Zunongwangia profunda SM-A87 chromosome, complete genomeTerC family integral membrane protein8e-43174
NC_020211:1704500:1708521170852117101041584Serratia marcescens WW4, complete genomeinner membrane protein1e-42173
NC_008314:1955793:195697719569771957729753Ralstonia eutropha H16 chromosome 2, complete sequenceMembrane protein possibly involved in tellurium resistance4e-42171
NC_004547:1600900:1604432160443216060181587Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-41168
NC_013421:3279499:3308508330850833102411734Pectobacterium wasabiae WPP163, complete genomeIntegral membrane protein TerC6e-41167
NC_015224:1763848:1767480176748017690661587Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-40165
NC_004129:4596040:461209246120924612847756Pseudomonas fluorescens Pf-5, complete genomemembrane protein, TerC family4e-40164
NC_010278:1235934:125240112524011253132732Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein7e-40164
NC_015566:1659288:1668087166808716696731587Serratia sp. AS12 chromosome, complete genomeintegral membrane protein TerC1e-39163
NC_015567:1660462:1668099166809916696851587Serratia sp. AS9 chromosome, complete genomeintegral membrane protein TerC1e-39163
NC_020064:1547524:1550950155095015525331584Serratia marcescens FGI94, complete genomemembrane protein TerC, possibly involved in tellurium resistance1e-39163
NC_007974:785216:803116803116803877762Ralstonia metallidurans CH34 chromosome 2, complete sequenceIntegral membrane protein TerC1e-39163
NC_009832:1719149:1723194172319417247801587Serratia proteamaculans 568, complete genomeIntegral membrane protein TerC9e-40163
NC_014500:1491660:1496310149631014978991590Dickeya dadantii 3937 chromosome, complete genomehypothetical protein4e-39161
NC_005773:3253575:3269816326981632713841569Pseudomonas syringae pv. phaseolicola 1448A, complete genomemembrane protein, TerC family4e-39161
NC_015161:199666:213352213352214131780Deinococcus proteolyticus MRP chromosome, complete genomeIntegral membrane protein TerC7e-39160
NC_007005:2686551:2718182271818227197501569Pseudomonas syringae pv. syringae B728a, complete genomeCBS:Transporter-associated region:Integral membrane protein TerC7e-39160
NC_012917:1506083:1509611150961115111971587Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeIntegral membrane protein TerC8e-39160
NC_012880:2399205:2399205239920524007581554Dickeya dadantii Ech703, complete genomeIntegral membrane protein TerC9e-39160
NC_009667:1934818:1948734194873419503021569Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceintegral membrane protein TerC1e-38159
NC_013850:1658010:1660253166025316618361584Klebsiella variicola At-22 chromosome, complete genomeIntegral membrane protein TerC5e-38157
NC_011283:1690193:1692444169244416940271584Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-38157
NC_009800:2156091:2181966218196621835491584Escherichia coli HS, complete genome3e-37155
NC_015663:4950000:5007860500786050094461587Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transmembrane protein8e-37154
NC_020181:360500:3647453647453663311587Enterobacter aerogenes EA1509E, complete genomePutative capsular polysaccharide transport protein YegH2e-36152
NC_007606:1999870:2002615200261520042371623Shigella dysenteriae Sd197, complete genomeputative transport protein8e-36150
NC_021066:460292:4626434626434642291587Raoultella ornithinolytica B6, complete genomeputative transmembrane protein2e-35149
NC_013947:6221877:623327562332756234033759Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeIntegral membrane protein TerC8e-35147
NC_004603:1519904:152769115276911527984294Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein6e-35147
NC_016818:1927500:1930834193083419324231590Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completemembrane protein TerC, possibly involved in tellurium resistance2e-34145
NC_017047:1862893:1867385186738518689741590Rahnella aquatilis HX2 chromosome, complete genomeintegral membrane protein TerC9e-34143
NC_015061:1902251:1906743190674319083321590Rahnella sp. Y9602 chromosome, complete genomeIntegral membrane protein TerC9e-34143
NC_017511:543583:5691765691765707321557Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein1e-32140
NC_011035:566980:5929715929715945271557Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein2e-32139
NC_003296:1461538:1476136147613614777161581Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN7e-30130
NC_004757:2412161:2413308241330824148701563Nitrosomonas europaea ATCC 19718, complete genomeCBS domain2e-29129
NC_014655:3141144:316204331620433162810768Leadbetterella byssophila DSM 17132 chromosome, complete genomeintegral membrane protein terc8e-29127
NC_020301:669000:7096267096267111761551Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeintegral membrane protein TerC1e-28126
NC_012214:1588573:1588573158857315901381566Erwinia pyrifoliae Ep1/96, complete genomePutative transmembrane protein YegH2e-26119
NC_007799:555900:572229572229572915687Ehrlichia chaffeensis str. Arkansas, complete genomemembrane protein, TerC family2e-26119
NC_016001:976556:989704989704990561858Flavobacterium branchiophilum, complete genomeTerC family membrane protein1e-25117
NC_006831:772737:775198775198775905708Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein3e-23108
NC_005295:796437:798898798898799605708Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein1e-21103
NC_006832:776286:778747778747779454708Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein1e-21103
NC_013009:721823:723279723279723977699Neorickettsia risticii str. Illinois, complete genomemembrane protein, TerC family1e-21103
NC_007798:703922:705371705371706045675Neorickettsia sennetsu str. Miyayama, complete genomemembrane protein, TerC family4e-1891.7
NC_016641:2700765:272182427218242722558735Paenibacillus terrae HPL-003 chromosome, complete genometerc4e-0961.6
NC_005070:1144777:118321211832121183940729Synechococcus sp. WH 8102, complete genomeTerC family protein4e-0652