Pre_GI: BLASTP Hits

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Query: NC_004578:934867:934867 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 934867, End: 935535, Length: 669

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1636875:163621016362101636878669Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-114410
NC_012560:3667177:368823536882353688891657Azotobacter vinelandii DJ, complete genomehypothetical protein6e-84310
NC_021150:3667176:368823436882343688890657Azotobacter vinelandii CA6, complete genomehypothetical protein6e-84310
NC_015379:2417312:244532024453202446003684Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein9e-74276
NC_004129:5373886:543179654317965432440645Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-72271
NC_011662:1041725:104405910440591044751693Thauera sp. MZ1T, complete genomehypothetical protein4e-72270
NC_011662:1017933:104405910440591044751693Thauera sp. MZ1T, complete genomehypothetical protein4e-72270
NC_015422:1876102:189739618973961898088693Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein2e-71268
NC_011992:1213726:123132712313271232019693Acidovorax ebreus TPSY, complete genomeputative secreted protein3e-70265
NC_010170:1498253:153877915387791539471693Bordetella petrii, complete genomehypothetical protein1e-70265
NC_012691:2614603:266385626638562664536681Tolumonas auensis DSM 9187, complete genomeputative secreted protein3e-70264
NC_009138:1974935:202343620234362024125690Herminiimonas arsenicoxydans, complete genomehypothetical protein4e-70264
NC_011901:2983555:299505029950502995718669Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein5e-70263
NC_008344:49039:901319013190811681Nitrosomonas eutropha C91, complete genomeputative secreted protein1e-69262
NC_018080:5091772:516286251628625163521660Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-69261
NC_008463:5313527:533360453336045334263660Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-68259
NC_012912:483390:507092507092507772681Dickeya zeae Ech1591, complete genomeputative secreted protein8e-69259
NC_009656:4527457:463785146378514638510660Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein8e-69259
NC_015726:2862500:288414228841422884831690Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-68258
NC_006513:1379735:144125214412521441941690Azoarcus sp. EbN1, complete genomehypothetical protein3e-68258
NC_016830:3869572:391514739151473915788642Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein5e-68257
NC_012660:2045398:210744521074452108095651Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein6e-68256
NC_014228:3534378:353999135399913540647657Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-59229
NC_012731:600518:605557605557606240684Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-59227
NC_013892:1483000:149131714913171491973657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-58226
NC_009708:4182460:418809741880974188750654Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-57223
NC_015566:316340:336913336913337584672Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-57222
NC_009832:4521585:454908745490874549758672Serratia proteamaculans 568, complete genomehypothetical protein4e-57221
NC_010554:2789722:282045428204542821098645Proteus mirabilis HI4320, complete genomehypothetical protein6e-57220
NC_014029:331919:367298367298367969672Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-56218
NC_013892:3278647:330606333060633306719657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-56218
NC_004547:611178:631392631392632048657Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-53208
NC_015572:2186394:221947522194752220119645Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein6e-39160