Pre_GI: BLASTP Hits

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Query: NC_004578:895019:917806 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 917806, End: 918744, Length: 939

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1605000:161816316181631619101939Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF15271e-159562
NC_011662:1017933:103543110354311036375945Thauera sp. MZ1T, complete genomeprotein of unknown function DUF15275e-127454
NC_010170:1417615:143599414359941436938945Bordetella petrii, complete genomehypothetical protein7e-127453
NC_021150:3698696:369905836990583699990933Azotobacter vinelandii CA6, complete genomehypothetical protein7e-125447
NC_012560:3698697:369905936990593699991933Azotobacter vinelandii DJ, complete genomehypothetical protein7e-125447
NC_006513:1379735:143253314325331433483951Azoarcus sp. EbN1, complete genomehypothetical protein9e-125446
NC_012912:483390:498388498388499314927Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF15271e-124446
NC_003902:3666544:368914936891493690087939Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-124444
NC_007086:1224867:125770912577091258647939Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein5e-124444
NC_008463:5313527:534178853417885342726939Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-124444
NC_018080:5091772:517297451729745173912939Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein7e-124443
NC_009656:4527457:464738946473894648327939Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein8e-124443
NC_014640:1179382:117938211793821180332951Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein8e-124443
NC_004129:5373886:544211354421135443051939Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-123440
NC_010002:4572573:457367545736754574622948Delftia acidovorans SPH-1, complete genomeprotein of unknown function DUF15275e-122437
NC_012691:2614603:267221026722102673142933Tolumonas auensis DSM 9187, complete genomeprotein of unknown function DUF15271e-121436
NC_015726:2862500:287543428754342876384951Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-121435
NC_010170:1551923:1551923155192315529901068Bordetella petrii, complete genomehypothetical protein3e-121434
NC_009138:1974935:203182120318212032768948Herminiimonas arsenicoxydans, complete genomehypothetical protein8e-121433
NC_013421:1744928:176151817615181762453936Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15273e-120431
NC_008344:49039:757627576276694933Nitrosomonas eutropha C91, complete genomeprotein of unknown function DUF15272e-119428
NC_015379:2417312:243476724347672435720954Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein1e-113409
NC_010688:2850164:285016428501642851129966Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-113408
NC_012660:2045398:209970920997092100665957Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-104379
NC_007492:3462929:346292934629293463885957Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF15272e-103375
NC_016830:3869572:389110438911043891979876Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-103374
NC_009512:3334579:3334579333457933356101032Pseudomonas putida F1, complete genomeprotein of unknown function DUF15273e-98358
NC_017986:409899:408925408925409902978Pseudomonas putida ND6 chromosome, complete genomehypothetical protein5e-97354
NC_010501:3671517:367151736715173672494978Pseudomonas putida W619, complete genomeprotein of unknown function DUF15274e-97354
NC_012731:560199:5865955865955877101116Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-87320
NC_016832:4425330:442571944257194426687969Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,PFL4710 family integrating conjugative element protein1e-84313
NC_012125:4536383:453677245367724537740969Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-84313
NC_003198:4453457:445384644538464454814969Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-84313
NC_013421:701005:719271719271720239969Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15274e-84311
NC_012214:3303955:331961033196103320581972Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein7e-83307
NC_015733:2581324:263357326335732634334762Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-82305
NC_016809:112410:127426127426128367942Haemophilus influenzae 10810, complete genomeexported protein1e-81303
NC_016845:4498097:451960845196084520549942Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-80299
NC_004547:639726:639726639726640700975Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-80298
NC_014029:331919:3789463789463799531008Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-79296
NC_015566:345084:3468803468803478871008Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein6e-79294
NC_015567:346500:3470453470453480521008Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein6e-79294
NC_012779:346998:355672355672356664993Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-78292
NC_014532:3596097:359512035951203596100981Halomonas elongata DSM 2581, complete genomehypothetical protein3e-78291
NC_014228:3442159:345499734549973455965969Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-78291
NC_018691:2288000:230737623073762308329954Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein5e-75281
NC_010554:2789722:281047528104752811449975Proteus mirabilis HI4320, complete genomehypothetical protein5e-73274
NC_013892:1457500:146359114635911464559969Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-72273
NC_014228:3353896:336533133653313366257927Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-69261
NC_013961:629307:650350650350651249900Erwinia amylovora, complete genomehypothetical protein3e-68258
NC_013971:3117000:312005231200523120951900Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-68258
NC_009792:3245368:324980232498023250482681Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-59228
NC_010067:3056774:305958830595883060268681Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-59228
NC_015554:4648919:4672653467265346736661014Alteromonas sp. SN2 chromosome, complete genomehypothetical protein6e-57221
NC_018697:1343756:1379226137922613802391014Cycloclasticus sp. P1 chromosome, complete genomeputative secreted protein6e-49194
NC_008752:3007073:3026177302617730274721296Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF15272e-1789.7
NC_013716:3512950:353390635339063534106201Citrobacter rodentium ICC168, complete genome2e-1169.7