Pre_GI: BLASTP Hits

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Query: NC_004578:5916711:5943909 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5943909, End: 5945138, Length: 1230

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:321695:3400763400763413051230Pseudomonas syringae pv. syringae B728a, complete genome2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase0723
NC_008322:722612:7226127226127238351224Shewanella sp. MR-7, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family2e-75283
NC_008577:4183361:4203163420316342043861224Shewanella sp. ANA-3 chromosome 1, complete sequenceUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family8e-75281
NC_008321:3964414:3980665398066539818881224Shewanella sp. MR-4, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family2e-74279
NC_008750:807446:8074468074468086691224Shewanella sp. W3-18-1, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family9e-74277
NC_008345:3756977:3772508377250837737311224Shewanella frigidimarina NCIMB 400, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein2e-72273
NC_013421:553193:5736615736615748721212Pectobacterium wasabiae WPP163, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family7e-69261
NC_012912:4071859:4076590407659040778011212Dickeya zeae Ech1591, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family4e-66252
NC_016612:3087615:3106665310666531078401176Klebsiella oxytoca KCTC 1686 chromosome, complete genome2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase1e-60233
NC_010939:1986263:2020259202025920214251167Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinolhydroxylase5e-60232
NC_010278:1918000:1942943194294319441091167Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase2e-59230
NC_008309:1289370:1306116130611613072821167Haemophilus somnus 129PT, complete genomepossible 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase2e-55217
NC_010519:1802294:1820460182046018216261167Haemophilus somnus 2336 chromosome, complete genomeUbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase1e-55217
NC_011884:1998559:2016268201626820175871320Cyanothece sp. PCC 7425, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family1e-50201
NC_006512:2211654:2231089223108922322671179Idiomarina loihiensis L2TR, complete genomeFAD-binding oxidoreductase, UbiH/Coq6 family7e-47188
NC_011761:2131911:2136212213621221373991188Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete2-octaprenyl-6-methoxyphenol hydroxylase4e-46186
NC_011206:2019577:2021744202174420229311188Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family4e-46186
NC_007005:321695:3388373388373400241188Pseudomonas syringae pv. syringae B728a, complete genome2-octaprenyl-6-methoxyphenyl hydroxylase3e-44179
NC_007614:2764848:2792058279205827932271170Nitrosospira multiformis ATCC 25196 chromosome 1, completeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family7e-44178
NC_013421:553193:5749025749025760801179Pectobacterium wasabiae WPP163, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase4e-43175
NC_008345:3756977:3773756377375637750301275Shewanella frigidimarina NCIMB 400, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase7e-42171
NC_012912:4071859:4075390407539040765681179Dickeya zeae Ech1591, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase1e-41171
NC_006512:2211654:2232264223226422334301167Idiomarina loihiensis L2TR, complete genome2-polyprenyl-6-methoxyphenol hydroxylase6e-41168
NC_008321:3964414:3981925398192539831481224Shewanella sp. MR-4, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase1e-40167
NC_008577:4183361:4204423420442342056281206Shewanella sp. ANA-3 chromosome 1, complete sequence2-polyprenyl-6-methoxyphenol 4-hydroxylase3e-40166
NC_012856:2931995:2933883293388329351781296Ralstonia pickettii 12D chromosome 1, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family1e-38161
NC_012026:1135041:1142242114224211434081167Anaplasma marginale str. Florida, complete genome2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiH)1e-35150
NC_004842:1132441:1138038113803811392041167Anaplasma marginale str. St. Maries, complete genome2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase2e-35150
NC_016616:1091606:1131720113172011328771158Dechlorosoma suillum PS chromosome, complete genomeUbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase2e-34146
NC_014323:4792048:4796234479623447974661233Herbaspirillum seropedicae SmR1 chromosome, complete genome2-polyprenyl-6-methoxyphenol hydroxylase2e-33144
NC_017059:967309:9693449693449705461203Rhodospirillum photometricum DSM 122, complete genome2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase5e-33142
NC_016027:1401500:1417175141717514183561182Gluconacetobacter xylinus NBRC 3288, complete genomemonooxygenase9e-32138
NC_015675:6228000:6244217624421762454041188Mesorhizobium opportunistum WSM2075 chromosome, complete genomeUbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase2e-28126
NC_014923:5666619:5689546568954656907331188Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family2e-28126
NC_019973:5601346:5618506561850656196931188Mesorhizobium australicum WSM2073, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family2e-28126
NC_011206:2019577:2020525202052520217541230Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family1e-27124
NC_011761:2131911:2134993213499321362221230Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete2-octaprenyl-6-methoxyphenol hydroxylase1e-27124
NC_010125:74904:7952179521806991179Gluconacetobacter diazotrophicus PAl 5, complete genomeputative FAD dependent oxidoreductase2e-27123
NC_011985:1831961:1848461184846118496631203Agrobacterium radiobacter K84 chromosome 1, complete genome2-octaprenyl-6-methoxyphenol hydroxylase protein5e-27122
NC_007614:109000:1349291349291362361308Nitrosospira multiformis ATCC 25196 chromosome 1, completeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family2e-26120
NC_007798:301456:3140013140013151341134Neorickettsia sennetsu str. Miyayama, complete genomeubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family6e-1995.5
NC_013440:4235489:4250039425003942515501512Haliangium ochraceum DSM 14365, complete genomemonooxygenase FAD-binding protein1e-0758.2
NC_009953:3426344:3444038344403834452371200Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein6e-0755.5
NC_014013:112008:1276641276641288811218Sphingobium japonicum UT26S chromosome 2, complete genomeputative monooxygenase2e-0653.9
NC_013510:170199:1711941711941726751482Thermomonospora curvata DSM 43183, complete genomemonooxygenase FAD-binding protein2e-0653.9
NC_012803:3691:3455934559357761218Micrococcus luteus NCTC 2665, complete genome2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase3e-0653.5
NC_010545:236000:245853245853246848996Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein3e-0653.5