Pre_GI: BLASTP Hits

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Query: NC_004578:5916711:5924253 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5924253, End: 5926277, Length: 2025

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:6138669:6149242614924261516202379Pseudomonas syringae pv. tomato str. DC3000, complete genomeEF hand domain protein0807
NC_014118:1171411:1179632117963211821632532Burkholderia sp. CCGE1002 chromosome chromosome 2, completechitinase-like protein2e-105383
NC_020829:809457:8171568171568200322877Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein9e-88325
NC_010067:2529750:2539587253958725418032217Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-61236
NC_004578:5916711:593108759310875932019933Pseudomonas syringae pv. tomato str. DC3000, complete genomeEF hand domain protein2e-54214
NC_004578:5916711:592712959271295928061933Pseudomonas syringae pv. tomato str. DC3000, complete genomeEF hand domain protein2e-54214
NC_014500:4691915:4699276469927647015822307Dickeya dadantii 3937 chromosome, complete genomeEF hand domain-containing protein3e-34147
NC_016835:1:5143514377942652Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,putative chitinase2e-29131
NC_016835:1:1327313273157052433Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,putative chitinase1e-27125
NC_004578:5916711:5928798592879859299761179Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-25117
NC_013961:629307:6394816394816422432763Erwinia amylovora, complete genomehypothetical protein2e-24115
NC_013971:3117000:3129058312905831318202763Erwinia amylovora ATCC 49946 chromosome, complete genomechitinase1e-24115
NC_013282:2026083:2036072203607220387352664Cronobacter turicensis, complete genomehypothetical protein8e-25115
NC_017060:125480:1334831334831369713489Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein2e-22108
NC_015062:130359:1366531366531401413489Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein2e-22108
NC_004578:5916711:592682659268265927059234Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-22107
NC_016835:1:1642816428182511824Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,hypothetical protein3e-21104
NC_010552:592154:6011786011786038052628Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechitinase-like protein5e-21103
NC_009439:101174:1085661085661117303165Pseudomonas mendocina ymp, complete genomeglycoside hydrolase family protein4e-20100
NC_013282:2026083:2031137203113720333382202Cronobacter turicensis, complete genomehypothetical protein6e-2099.8
NC_013282:2026083:2040822204082220430742253Cronobacter turicensis, complete genomehypothetical protein1e-1792
NC_010611:3771778:3780178378017837821842007Acinetobacter baumannii ACICU, complete genomepredicted chitinase2e-1687.8
NC_017162:3817952:3826349382634938284212073Acinetobacter baumannii 1656-2 chromosome, complete genomechitinase2e-1687.8
NC_013592:4295449:431316143131614313787627Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 194e-1687.4
NC_017025:1761918:176969117696911770404714Flavobacterium indicum GPTSA100-9, complete genomeGlycoside hydrolase family 19, putative chitinase6e-1686.7
NC_010717:3868000:3873652387365238765462895Xanthomonas oryzae pv. oryzae PXO99A, complete genomeEF hand domain protein1e-1585.9
NC_014121:1682638:169633316963331696881549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelytic enzyme3e-1584.3
NC_012912:325913:332536332536333162627Dickeya zeae Ech1591, complete genomeglycoside hydrolase family 193e-1584.3
NC_016612:3314846:333598533359853336533549Klebsiella oxytoca KCTC 1686 chromosome, complete genomelytic enzyme2e-1584.3
NC_010067:2529750:2544273254427325473713099Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1583.6
NC_015663:4522109:452715045271504527779630Enterobacter aerogenes KCTC 2190 chromosome, complete genomelytic enzyme6e-1583.2
NC_007347:1:2040320403227332331Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein2e-1481.6
NC_013971:3117000:3125337312533731279972661Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein4e-1480.5
NC_013282:1200993:122515912251591225785627Cronobacter turicensis, complete genomeUncharacterized protein HI14154e-1480.5
NC_013961:629307:6433046433046459642661Erwinia amylovora, complete genomeEF hand domain protein4e-1480.5
NC_017047:1906000:191830019183001918926627Rahnella aquatilis HX2 chromosome, complete genomeputative endolysin4e-1480.5
NC_013282:2026083:2044962204496220471902229Cronobacter turicensis, complete genomehypothetical protein5e-1480.1
NC_008390:2448379:2456231245623124592002970Burkholderia cepacia AMMD chromosome 1, complete sequenceEF hand domain protein1e-1379
NC_009937:958576:961972961972962877906Azorhizobium caulinodans ORS 571, complete genomeputative chitinase1e-1275.5
NC_016835:1:98479847118441998Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,hypothetical protein6e-1273.2
NC_011601:2806392:281283928128392813465627Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendolysin2e-1171.6
NC_008570:2014151:2021749202174920243042556Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein3e-1171.2
NC_020054:4983691:498793949879394988610672Fibrella aestuarina BUZ 2 drat genomeputative chitinase3e-1170.9
NC_017325:1897500:189797818979781898946969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein1e-1068.9
NC_003047:3419212:3435808343580834377271920Sinorhizobium meliloti 1021, complete genomePUTATIVE PROTEASE TRANSMEMBRANE PROTEIN2e-1068.2
NC_017325:1488841:148964314896431490611969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein2e-1068.2
NC_012214:1974500:198840819884081989031624Erwinia pyrifoliae Ep1/96, complete genomeLytic enzyme2e-1068.2
NC_020301:853267:865370865370865978609Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein4e-1067
NC_017986:4124335:412990241299024130471570Pseudomonas putida ND6 chromosome, complete genomeglycoside hydrolase family protein7e-1066.2
NC_018748:1443176:1446411144641114540427632Emticicia oligotrophica DSM 17448 chromosome, complete genomeFibronectin type III domain protein1e-0965.9
NC_015761:1017301:102522610252261025840615Salmonella bongori NCTC 12419, complete genomebacteriophage protein1e-0965.5
NC_010397:1802724:1809368180936818107411374Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage protein2e-0965.1
NC_018607:2010500:201515420151542015747594Brachyspira pilosicoli B2904 chromosome, complete genomeglycoside hydrolase2e-0964.7
NC_003902:3514000:353599035359903536631642Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related lytic enzyme3e-0963.9
NC_013282:1804909:182501118250111825565555Cronobacter turicensis, complete genomehypothetical protein5e-0963.5
NC_014330:1324500:133383613338361334414579Brachyspira pilosicoli 95/1000 chromosome, complete genomeendolysin glycoside hydrolase5e-0963.5
NC_017243:58000:613536135361964612Brachyspira intermedia PWS/A chromosome, complete genomeglycoside hydrolase8e-0962.8
NC_014150:2560475:256367625636762564269594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 199e-0962.8
NC_019908:1886647:189339118933911893969579Brachyspira pilosicoli P43/6/78 chromosome, complete genomeendolysin glycoside hydrolase1e-0862.4
NC_018604:305957:314155314155314781627Brachyspira pilosicoli WesB complete genomeglycoside hydrolase family 191e-0862.4
NC_019908:807000:812628812628813203576Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycoside hydrolase family protein1e-0862.4
NC_018604:2871328:288056228805622881140579Brachyspira pilosicoli WesB complete genomeendolysin glycoside hydrolase1e-0862.4
NC_018607:2747462:275671727567172757295579Brachyspira pilosicoli B2904 chromosome, complete genomeendolysin glycoside hydrolase1e-0862
NC_011094:638552:664550664550665164615Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme3e-0861.2
NC_012660:4558122:457641545764154576948534Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage encoded lysozyme3e-0860.8
NC_014150:1497381:150134615013461501939594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 194e-0860.5
NC_014150:1936154:193923519392351939828594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 194e-0860.5
NC_012731:2083650:211163421116342112260627Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycoside hydrolase5e-0860.1
NC_010501:3575726:3589399358939935920682670Pseudomonas putida W619, complete genomehypothetical protein6e-0859.7
NC_020181:5217000:522775752277575228383627Enterobacter aerogenes EA1509E, complete genomehypothetical protein8e-0859.7
NC_011000:1262324:1273104127310412759862883Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein1e-0758.9
NC_010161:1501758:151116715111671511748582Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-0758.5
NC_010161:1324381:133379013337901334371582Bartonella tribocorum CIP 105476, complete genomepeptidoglycan binding protein2e-0758.5
NC_011770:1431740:145211114521111452728618Pseudomonas aeruginosa LESB58, complete genomeCOG3179: Predicted chitinase2e-0758.2
NC_014330:1593000:159658415965841597099516Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative Lys-endolysin; glycoside hydrolase2e-0758.2
NC_011770:860944:881683881683882300618Pseudomonas aeruginosa LESB58, complete genomePredicted chitinase; lytic protein2e-0758.2
NC_010002:3785313:378740737874073787958552Delftia acidovorans SPH-1, complete genomeputative lysozyme3e-0757.8
NC_004578:4432983:444604244460424446575534Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative3e-0757.4
NC_009648:1487692:1497730149773014994901761Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative membrane proteins3e-0757.4
NC_010161:2548254:255766425576642558245582Bartonella tribocorum CIP 105476, complete genomehypothetical protein5e-0757
NC_010161:1949637:195948819594881960069582Bartonella tribocorum CIP 105476, complete genomehypothetical protein5e-0757
NC_009648:1541699:156536715653671565993627Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative glycoside hydrolase9e-0755.8
NC_013850:2182337:220954522095452210171627Klebsiella variicola At-22 chromosome, complete genomeglycoside hydrolase family 199e-0755.8
NC_009256:2509806:2525295252529525279492655Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein3e-0653.9
NC_012725:97681:1109671109671138102844Burkholderia glumae BGR1 plasmid bglu_4p, complete sequencehypothetical protein5e-0653.5
NC_010625:670482:6788266788266810662241Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencepeptidase M23B6e-0653.1