Pre_GI: BLASTP Hits

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Query: NC_004578:568236:572573 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 572573, End: 573871, Length: 1299

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:3614817:3614817361481736161211305Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepeptidase M203e-73276
NC_002570:367000:3768113768113779351125Bacillus halodurans C-125, complete genomecarboxypeptidase G24e-30132
NC_013943:2547966:2565653256565325667621110Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomepeptidase M202e-24114
NC_013939:1841890:1865401186540118665191119Deferribacter desulfuricans SSM1, complete genomecarboxypeptidase G25e-22105
NC_012491:648756:6504086504086515441137Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-2099.4
NC_008752:2056547:2072046207204620732751230Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptidase M203e-1996.7
NC_015276:855150:8677408677408689691230Marinomonas mediterranea MMB-1 chromosome, complete genomepeptidase dimerization domain protein9e-1995.1
NC_021177:2766910:2781008278100827821891182Streptomyces fulvissimus DSM 40593, complete genomePeptidase M203e-1687
NC_020453:7409402:7411306741130674125621257Agromonas oligotrophica S58 DNA, complete genomeglutamate carboxypeptidase3e-1686.7
NC_014221:2943950:2961082296108229622361155Truepera radiovictrix DSM 17093 chromosome, complete genomepeptidase M202e-1584.3
NC_020291:1535402:1540382154038215415601179Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesuccinyl-diaminopimelate desuccinylase DapE5e-1479.3
NC_017093:3777178:3780926378092637820051080Actinoplanes missouriensis 431, complete genomeputative M20/M25/M40-family peptidase6e-1272.4
NC_003911:1265972:1272318127231812734481131Silicibacter pomeroyi DSS-3, complete genomecarboxypeptidase8e-1168.6
NC_013315:2232339:2245359224535922465461188Clostridium difficile CD196 chromosome, complete genomepeptidase7e-0858.9
NC_013316:2309694:2325913232591323271001188Clostridium difficile R20291, complete genomeputative amidohydrolase7e-0858.9