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Query: NC_004578:5192110:5200695 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 5200695, End: 5201093, Length: 399

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:4899252:490673649067364907134399Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-69261
NC_020829:940692:987323987323987727405Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-68257
NC_014752:834616:847842847842848252411Neisseria lactamica ST-640, complete genomehypothetical protein1e-0858.5
NC_004547:1174650:119183911918391192258420Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-0858.2
NC_009524:1369395:137739913773991377815417Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein1e-0755.5
NC_009792:3665369:368553836855383685936399Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0755.1
NC_016816:1545354:155497415549741555378405Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-0754.7
NC_010322:583842:594321594321594785465Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-0652
NC_014640:6815264:683657368365736837007435Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-0650.8
NC_015726:406450:418952418952419422471Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein3e-0650.8
NC_013421:1819036:185362218536221854020399Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-0649.7
NC_013941:3300000:333160233316023332000399Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-0648.9
NC_002695:3468873:349387034938703494268399Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-0648.9