Pre_GI: BLASTP Hits

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Query: NC_004578:4940000:4961699 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4961699, End: 4962649, Length: 951

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4857768:487748148774814878431951Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein9e-172602
NC_011901:837085:841365841365842318954Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completemutator MutT protein7e-59227
NC_014924:725380:728262728262729221960Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomemutator MutT protein7e-57221
NC_008610:1068429:108874110887411089664924Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),mutator MutT protein1e-50200
NC_007912:1111093:111511111151111116064954Saccharophagus degradans 2-40, complete genomeMutT/nudix family protein/thiamine-phosphate pyrophosphorylase, putative1e-48193
NC_018868:3943088:394720639472063948075870Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomemutator MutT protein5e-43174
NC_016616:1091606:109160610916061092553948Dechlorosoma suillum PS chromosome, complete genomethiamine monophosphate synthase1e-39163
NC_008321:458811:460496460496460894399Shewanella sp. MR-4, complete genomemutator MutT protein6e-36151
NC_009665:4675289:469441446944144694806393Shewanella baltica OS185 chromosome, complete genomemutator MutT protein3e-34145
NC_011663:4579777:459915845991584599550393Shewanella baltica OS223 chromosome, complete genomemutator MutT protein4e-34145
NC_002505:2537655:255984225598422560240399Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completemutator MutT protein3e-29129
NC_009457:2095366:211307421130742113472399Vibrio cholerae O395 chromosome 2, complete sequencemutator MutT protein3e-29129
NC_012578:2479150:249685724968572497255399Vibrio cholerae M66-2 chromosome I, complete sequencemutator MutT protein3e-29129
NC_012582:2626786:264449426444942644892399Vibrio cholerae O395 chromosome chromosome I, complete sequencemutator MutT protein3e-29129
NC_016445:2012294:202999620299962030394399Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completemutator MutT protein3e-29129
NC_016944:2588435:260614026061402606538399Vibrio cholerae IEC224 chromosome I, complete sequencemutator MutT protein3e-29129
NC_009654:2940278:294488829448882945274387Marinomonas sp. MWYL1, complete genomemutator MutT protein4e-29128
NC_006351:1631760:164222716422271642826600Burkholderia pseudomallei K96243 chromosome 2, complete sequencethiamine-phosphate pyrophosphorylase7e-28124
NC_015276:2769000:277560227756022775994393Marinomonas mediterranea MMB-1 chromosome, complete genomeNUDIX hydrolase8e-28124
NC_007435:305937:316346316346316984639Burkholderia pseudomallei 1710b chromosome II, complete sequenceDGTP-pyrophosphohydrolase; thiamine phosphate synthase1e-27124
NC_021066:3201500:322544332254433225838396Raoultella ornithinolytica B6, complete genomenucleoside triphosphate pyrophosphohydrolase5e-25115
NC_010159:3033989:305426030542603054646387Yersinia pestis Angola, complete genomemutator mutT protein2e-24113
NC_009465:938378:956171956171956785615Candidatus Vesicomyosocius okutanii HA, complete genomehypothetical protein7e-23108
NC_009078:1578500:158925115892511589751501Burkholderia pseudomallei 1106a chromosome II, complete sequenceputative thiamine-phosphate pyrophosphorylase1e-22107
NC_014147:1200984:121924512192451220192948Moraxella catarrhalis RH4 chromosome, complete genomeNUDIX hydrolase2e-22107
NC_013209:1969734:199097519909751991967993Acetobacter pasteurianus IFO 3283-01, complete genomeacetyltransferase2e-22106
NC_017100:1972389:199363019936301994622993Acetobacter pasteurianus IFO 3283-03, complete genomeacetyltransferase2e-22106
NC_017108:1969716:199095719909571991949993Acetobacter pasteurianus IFO 3283-12, complete genomeacetyltransferase2e-22106
NC_017111:1969704:199094519909451991937993Acetobacter pasteurianus IFO 3283-32, complete genomeacetyltransferase2e-22106
NC_017121:1969716:199095719909571991949993Acetobacter pasteurianus IFO 3283-07, complete genomeacetyltransferase2e-22106
NC_017125:1972384:199362519936251994617993Acetobacter pasteurianus IFO 3283-22, complete genomeacetyltransferase2e-22106
NC_017146:1972396:199363719936371994629993Acetobacter pasteurianus IFO 3283-26, complete genomeacetyltransferase2e-22106
NC_017150:1877480:189872118987211899713993Acetobacter pasteurianus IFO 3283-01-42C, complete genomeacetyltransferase2e-22106
NC_009074:3409849:343934634393463439795450Burkholderia pseudomallei 668 chromosome I, complete sequencemutator mutT protein1e-20100
NC_010296:54000:739007390074304405Microcystis aeruginosa NIES-843, complete genomemutator protein5e-2098.6
NC_010084:3051355:307579230757923076253462Burkholderia multivorans ATCC 17616 chromosome 1, completeNUDIX hydrolase1e-1997.4
NC_013222:817686:836046836046836483438Robiginitalea biformata HTCC2501, complete genomeNudix (MutT) family hydrolase/pyrophosphatase1e-1790.9
NC_019902:3397170:340126034012603401697438Thioalkalivibrio nitratireducens DSM 14787, complete genomePutative 7,8-Dihydro-8-oxoguanine-triphosphatase6e-1788.6
NC_011026:2624775:2631907263190726329891083Chloroherpeton thalassium ATCC 35110, complete genomeA/G-specific adenine glycosylase2e-1686.7
NC_015732:30472:638706387064286417Spirochaeta caldaria DSM 7334 chromosome, complete genomemutator MutT protein2e-1686.7
NC_008150:1705152:170926117092611709647387Yersinia pestis Antiqua, complete genomeputative pyrophosphohydrolase3e-1686.3
NC_004088:2366000:238252223825222382908387Yersinia pestis KIM, complete genomehypothetical protein3e-1686.3
NC_003143:2433190:243729924372992437685387Yersinia pestis CO92, complete genomeputative pyrophosphohydrolase3e-1686.3
NC_005810:2180303:218644021864402186826387Yersinia pestis biovar Microtus str. 91001, complete genomepyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase3e-1686.3
NC_010634:2376245:238241223824122382798387Yersinia pseudotuberculosis PB1/+, complete genomeNUDIX hydrolase3e-1686.3
NC_008149:1842500:184591318459131846299387Yersinia pestis Nepal516, complete genomepyrophosphohydrolase3e-1686.3
NC_010159:2440947:245463724546372455023387Yersinia pestis Angola, complete genomeCTP pyrophosphohydrolase3e-1686.3
NC_006155:2461262:246459524645952464981387Yersinia pseudotuberculosis IP 32953, complete genomeputative pyrophosphohydrolase3e-1686.3
NC_017154:2430093:243420224342022434588387Yersinia pestis D106004 chromosome, complete genomeputative pyrophosphohydrolase3e-1686.3
NC_017265:2087487:210421921042192104605387Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative pyrophosphohydrolase3e-1686.3
NC_014206:411143:428697428697429110414Geobacillus sp. C56-T3 chromosome, complete genomeNUDIX hydrolase2e-1583.6
NC_011979:3070110:308971130897113090121411Geobacter sp. FRC-32, complete genomeNUDIX hydrolase2e-1583.6
NC_012793:383612:407645407645408055411Geobacillus sp. WCH70, complete genomemutator MutT protein2e-1583.2
NC_009482:87193:1009261009261020861161Synechococcus sp. RCC307 chromosome, complete genomeA/G-specific DNA glycosylase3e-1583.2
NC_015422:910292:910292910292910717426Alicycliphilus denitrificans K601 chromosome, complete genomeNUDIX hydrolase3e-1582.8
NC_014910:966761:968914968914969339426Alicycliphilus denitrificans BC chromosome, complete genomenudix hydrolase3e-1582.8
NC_012914:336750:352974352974353372399Paenibacillus sp. JDR-2, complete genomeNUDIX hydrolase7e-1581.3
NC_013173:953633:993372993372993797426Desulfomicrobium baculatum DSM 4028, complete genomeNUDIX hydrolase2e-1480.5
NC_015660:3328595:333149333314933331903411Geobacillus thermoglucosidasius C56-YS93 chromosome, completeNUDIX hydrolase2e-1480.1
NC_011992:773905:791433791433791879447Acidovorax ebreus TPSY, complete genomeNUDIX hydrolase8e-1478.2
NC_014011:1264165:127978512797851280174390Aminobacterium colombiense DSM 12261 chromosome, complete genomeNUDIX hydrolase7e-1478.2
NC_008800:2448583:246397624639762464362387Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase9e-1477.8
NC_015224:2618192:263327326332732633659387Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase9e-1477.8
NC_008782:841134:843293843293843739447Acidovorax sp. JS42, complete genomeNUDIX hydrolase1e-1377.4
NC_020272:162779:168370168370168759390Bacillus amyloliquefaciens IT-45, complete genome7,8-dihydro-8-oxoguanine-triphosphatase3e-1375.9
NC_014550:3534000:354566735456673546059393Arthrobacter arilaitensis Re117, complete genomeNUDIX domain-containing protein5e-1375.5
NC_012563:811993:815797815797816195399Clostridium botulinum A2 str. Kyoto, complete genomeputative mutator mutT protein1e-1273.9
NC_013740:1218429:1240102124010212423302229Acidaminococcus fermentans DSM 20731, complete genomeNUDIX hydrolase1e-1273.9
NC_015410:1202370:121078712107871211176390Pseudomonas mendocina NK-01 chromosome, complete genomemutator MutT protein3e-1272.8
NC_009483:2854500:287088028708802871296417Geobacter uraniireducens Rf4 chromosome, complete genomeNUDIX hydrolase3e-1272.8
NC_008095:5312926:533388253338825334289408Myxococcus xanthus DK 1622, complete genomehydrolase, NUDIX family5e-1272
NC_020126:6190662:621175962117596212166408Myxococcus stipitatus DSM 14675, complete genomeNUDIX family hydrolase6e-1272
NC_015573:2323268:233579623357962336188393Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeNUDIX hydrolase6e-1271.6
NC_007517:1998342:200510920051092005573465Geobacter metallireducens GS-15, complete genomeNUDIX hydrolase9e-1271.2
NC_014165:3559305:357717235771723577558387Thermobispora bispora DSM 43833 chromosome, complete genomeNUDIX hydrolase1e-1170.9
NC_010545:83353:950759507595473399Corynebacterium urealyticum DSM 7109, complete genomeputative pyrophosphohydrolase4e-1168.9
NC_015499:491423:4971724971724981791008Thermodesulfobium narugense DSM 14796 chromosome, complete genomeThiamine-phosphate pyrophosphorylase8e-1168.2
NC_013093:832971:834452834452835255804Actinosynnema mirum DSM 43827, complete genomeNUDIX hydrolase9e-1167.8
NC_016627:1485799:152021715202171520609393Clostridium clariflavum DSM 19732 chromosome, complete genomeADP-ribose pyrophosphatase1e-1067.4
NC_020302:1241504:126117612611761261574399Corynebacterium halotolerans YIM 70093 = DSM 44683, completeNTP pyrophosphohydrolase2e-1066.6
NC_015711:7265439:728624172862417286648408Myxococcus fulvus HW-1 chromosome, complete genomeNUDIX family hydrolase2e-1066.6
NC_002952:2653482:265634526563452656737393Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative NUDIX hydrolase2e-1066.6
NC_007795:2561928:256479125647912565183393Staphylococcus aureus subsp. aureus NCTC 8325, complete genomepyrophosphohydrolase, putative2e-1066.6
NC_009641:2619759:262262226226222623014393Staphylococcus aureus subsp. aureus str. Newman chromosome,hydrolase2e-1066.6
NC_016912:2433500:243600224360022436394393Staphylococcus aureus subsp. aureus VC40 chromosome, completeMutT/NUDIX family hydrolase2e-1066.6
NC_014962:3440826:345680934568093457183375Isosphaera pallida ATCC 43644 chromosome, complete genomeNUDIX hydrolase2e-1066.6
NC_014033:772754:778050778050778436387Prevotella ruminicola 23 chromosome, complete genomemutator mutT protein2e-1066.6
NC_017343:2474743:247760624776062477998393Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeNUDIX domain-containing protein3e-1066.2
NC_002953:2541264:254412725441272544519393Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative NUDIX hydrolase3e-1066.2
NC_003923:2561953:256481025648102565202393Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein3e-1066.2
NC_002745:2553138:255447125544712554863393Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein3e-1066.2
NC_016941:2498299:250116225011622501554393Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative NUDIX hydrolase4e-1065.9
NC_014033:772754:780048780048780437390Prevotella ruminicola 23 chromosome, complete genomemutator mutT protein4e-1065.5
NC_015380:99919:119210119210119626417Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome5-methyl-dCTP pyrophosphohydrolase7e-1065.1
NC_016928:2517691:251985225198522520244393Staphylococcus aureus subsp. aureus M013 chromosome, completeMutator mutT protein2e-0963.5
NC_001263:243000:262878262878263456579Deinococcus radiodurans R1 chromosome 1, complete sequenceMutT/nudix family protein3e-0962.8
NC_008554:840079:845143845143845517375Syntrophobacter fumaroxidans MPOB, complete genome3e-0962.8
NC_010556:316996:318218318218318628411Exiguobacterium sibiricum 255-15, complete genomeNUDIX hydrolase4e-0962.4
NC_021184:148000:149503149503149775273Desulfotomaculum gibsoniae DSM 7213, complete genomeADP-ribose pyrophosphatase6e-0962
NC_013715:1606396:161052716105271611009483Rothia mucilaginosa DY-18, complete genomeNTP pyrophosphohydrolase including oxidative damage repair enzyme5e-0962
NC_014215:322362:329883329883330326444Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,NUDIX hydrolase2e-0860.1
NC_013889:2603914:261396126139612614377417Thioalkalivibrio sp. K90mix chromosome, complete genomeNUDIX hydrolase2e-0860.1
NC_013665:1123943:112394311239431124590648Methanocella paludicola SANAE, complete genomethiamine-phosphate pyrophosphorylase3e-0859.7
NC_004578:4708220:471159947115994712009411Pseudomonas syringae pv. tomato str. DC3000, complete genomemutT/nudix family protein3e-0859.7
NC_015873:1487127:150782115078211508219399Megasphaera elsdenii DSM 20460, complete genomeputative CTP pyrophosphohydrolase3e-0859.7
NC_015275:309133:312701312701313105405Clostridium lentocellum DSM 5427 chromosome, complete genomeNUDIX hydrolase1e-0757.4
NC_015577:3589884:361412136141213614525405Treponema azotonutricium ZAS-9 chromosome, complete genomeCTP pyrophosphohydrolase2e-0757
NC_015214:437733:454069454069454491423Lactobacillus acidophilus 30SC chromosome, complete genomemutator protein4e-0755.8
NC_017214:1304774:131112613111261311743618Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete7,8-dihydro-8-oxoguanine-triphosphatase4e-0755.8
NC_017215:669358:675711675711676328618Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides4e-0755.8
NC_017217:669437:676006676006676407402Bifidobacterium animalis subsp. lactis V9 chromosome, completeputative pyrophosphohydrolase5e-0755.5
NC_017216:669296:675865675865676266402Bifidobacterium animalis subsp. lactis BLC1, complete genomeputative pyrophosphohydrolase5e-0755.5
NC_011835:1395716:140228514022851402686402Bifidobacterium animalis subsp. lactis AD011 chromosome, completeNTP pyrophosphohydrolase5e-0755.5
NC_012814:669434:676003676003676404402Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative pyrophosphohydrolase5e-0755.5
NC_012815:669436:676005676005676406402Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative pyrophosphohydrolase5e-0755.5
NC_014724:439594:456800456800457222423Lactobacillus amylovorus GRL 1112 chromosome, complete genomeputative mutator protein7e-0755.1
NC_014831:2201246:222146822214682222166699Thermaerobacter marianensis DSM 12885 chromosome, complete genomethiamine-phosphate diphosphorylase6e-0755.1
NC_016109:5768000:579440257944025794803402Kitasatospora setae KM-6054, complete genomehypothetical protein9e-0754.7
NC_013165:1294000:130042313004231300812390Slackia heliotrinireducens DSM 20476, complete genomeADP-ribose pyrophosphatase1e-0654.3
NC_016109:4645905:465854046585404658956417Kitasatospora setae KM-6054, complete genomeputative hydrolase1e-0653.9
NC_007759:1028977:107261110726111073042432Syntrophus aciditrophicus SB, complete genomenudix domain protein2e-0653.5
NC_009725:496443:5486775486775499121236Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-0653.5
NC_020410:495184:5312675312675325051239Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized 45.4 kDa protein in thiaminase I 5'region (Protein nagD homolog)2e-0653.5
NC_020063:1051310:105838010583801058787408Enterobacteriaceae bacterium strain FGI 57, complete genomeADP-ribose pyrophosphatase3e-0652.8
NC_016948:678939:688874688874689302429Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein3e-0652.8
NC_007168:2448422:245294424529442453363420Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein4e-0652.4
NC_017150:255474:271941271941272363423Acetobacter pasteurianus IFO 3283-01-42C, complete genomeADP-ribose pyrophosphatase4e-0652.4
NC_007508:64955:876748767488126453Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative NUDIX hydrolase family protein5e-0652
NC_016010:65949:880398803988482444Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeADP-ribose pyrophosphatase5e-0652
NC_007777:3824291:383269638326963833229534Frankia sp. CcI3, complete genomeNUDIX hydrolase7e-0651.6
NC_019897:1224798:124622312462231246681459Thermobacillus composti KWC4 chromosome, complete genomeZn-finger containing NTP pyrophosphohydrolase1e-0551.2