Pre_GI: BLASTP Hits

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Query: NC_004578:4869673:4884649 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4884649, End: 4885992, Length: 1344

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014924:3065430:3086066308606630873641299Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeprotein of unknown function DUF588e-73274
NC_011884:1541256:1553173155317315545821410Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF582e-37157
NC_014829:4565467:4582953458295345842541302Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeprotein of unknown function DUF585e-28125
NC_018645:1798874:182393918239391824817879Desulfobacula toluolica Tol2, complete genomehypothetical protein5e-1892.8
NC_014364:394899:467447467447468319873Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF584e-1789.7
NC_009613:148273:165168165168166034867Flavobacterium psychrophilum JIP02/86, complete genomehypothetical protein9e-1582
NC_013174:2624365:262757526275752628471897Jonesia denitrificans DSM 20603, complete genomeprotein of unknown function DUF583e-1480.5
NC_008322:641197:661340661340662335996Shewanella sp. MR-7, complete genomeprotein of unknown function DUF584e-1479.7
NC_013947:1665994:1668250166825016695391290Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein5e-1479.3
NC_015581:1891409:191829919182991919222924Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein8e-1375.5
NC_018607:2032566:204715720471572048044888Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein1e-1274.7
NC_018604:838932:854429854429855316888Brachyspira pilosicoli WesB complete genomevon Willebrand factor type A vWA domain-containing protein1e-1274.7
NC_014008:720470:745997745997746857861Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeprotein of unknown function DUF582e-1273.9
NC_015638:1029721:104306110430611043924864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomehypothetical protein2e-1273.9
NC_020156:1220755:122640312264031227266864Nonlabens dokdonensis DSW-6, complete genomehypothetical protein3e-1273.6
NC_020126:8080574:810434781043478105228882Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1273.6
NC_006841:750000:751072751072752031960Vibrio fischeri ES114 chromosome II, complete sequencehypothetical cytosolic protein3e-1273.6
NC_011186:819828:824026824026824985960Vibrio fischeri MJ11 chromosome II, complete sequencehypothetical cytosolic protein3e-1273.6
NC_011886:2369980:239343723934372394330894Arthrobacter chlorophenolicus A6, complete genomeprotein of unknown function DUF581e-1171.2
NC_019942:596000:6084416084416096161176Aciduliprofundum sp. MAR08-339, complete genomehypothetical protein2e-1170.9
NC_009662:383381:395496395496396329834Nitratiruptor sp. SB155-2, complete genomehypothetical protein3e-1170.1
NC_015680:1562535:1602912160291216042041293Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein5e-1066.2
NC_000868:1562000:1562493156249315637281236Pyrococcus abyssi GE5, complete genomehypothetical protein6e-1065.9
NC_015733:1793399:181207518120751813019945Pseudomonas putida S16 chromosome, complete genomehypothetical protein9e-1065.5
NC_008553:1156285:117886011788601179714855Methanosaeta thermophila PT, complete genomehypothetical protein2e-0963.9
NC_012883:1:87438743100411299Thermococcus sibiricus MM 739, complete genomeDUF58 domain containing protein4e-0963.2
NC_006371:1997954:201958720195872020525939Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein4e-0963.2
NC_008571:3165143:318274631827463183675930Gramella forsetii KT0803, complete genomehypothetical protein9e-0962
NC_015501:154590:162327162327163199873Porphyromonas asaccharolytica DSM 20707 chromosome, completeprotein of unknown function DUF581e-0861.6
NC_014387:2661496:269757026975702698469900Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein1e-0861.6
NC_014735:149922:1705121705121719541443Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completehypothetical protein4e-0860.1
NC_002607:169721:1883031883031895651263Halobacterium sp. NRC-1, complete genomehypothetical protein3e-0860.1
NC_013202:59278:9079990799922201422Halomicrobium mukohataei DSM 12286, complete genomeprotein of unknown function DUF585e-0859.7
NC_015663:770485:791140791140792042903Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-0758.2
NC_015520:1619000:162639316263931627274882Mahella australiensis 50-1 BON chromosome, complete genomehypothetical protein1e-0758.2
NC_013959:826868:832217832217833116900Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function DUF581e-0758.2
NC_017955:3545626:357312535731253574102978Modestobacter marinus, complete genomehypothetical protein2e-0757.8
NC_013222:229190:234854234854235786933Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-0757.8
NC_009663:2478311:248194824819482482886939Sulfurovum sp. NBC37-1, complete genomehypothetical protein2e-0757.8
NC_008345:3199965:321984832198483220783936Shewanella frigidimarina NCIMB 400, complete genomeprotein of unknown function DUF584e-0756.2
NC_008700:2607526:262534326253432626299957Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein5e-0756.2
NC_016627:494497:501704501704502582879Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein6e-0755.8
NC_016943:3037382:3058319305831930593441026Blastococcus saxobsidens DD2, complete genomehypothetical protein2e-0654.3
NC_009052:3229775:324804132480413248994954Shewanella baltica OS155, complete genomeprotein of unknown function DUF582e-0654.3
NC_014355:288000:3030543030543041961143Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0653.9
NC_015138:1143015:116343511634351164415981Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein4e-0653.1
NC_005140:444353:444829444829445746918Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein6e-0652.8
NC_013158:1027015:1058937105893710604961560Halorhabdus utahensis DSM 12940, complete genomeprotein of unknown function DUF586e-0652.8
NC_011901:39215:479954799548990996Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-0652.8
NC_004460:1718088:171952817195281720445918Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein9e-0652