Pre_GI: BLASTP Hits

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Query: NC_004578:4708220:4711599 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4711599, End: 4712009, Length: 411

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014550:615609:626126626126626536411Arthrobacter arilaitensis Re117, complete genomehypothetical protein1e-1581.6
NC_020829:1840281:186660218666021867009408Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-1581.3
NC_013209:2248119:228756322875632287982420Acetobacter pasteurianus IFO 3283-01, complete genomephosphohydrolase3e-1580.5
NC_020063:1051310:105838010583801058787408Enterobacteriaceae bacterium strain FGI 57, complete genomeADP-ribose pyrophosphatase6e-1579.3
NC_016845:1407339:142162814216281422026399Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,NUDIX hydrolase2e-1477.8
NC_016612:2902628:291850729185072918818312Klebsiella oxytoca KCTC 1686 chromosome, complete genomeNUDIX hydrolase1e-1065.1