Pre_GI: BLASTP Hits

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Query: NC_004578:4204235:4221290 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4221290, End: 4221562, Length: 273

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015563:6167512:618571761857176186025309Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein7e-1889.4
NC_015410:2351464:235883523588352359107273Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-31133
NC_007347:2421942:243894324389432439251309Ralstonia eutropha JMP134 chromosome 1, complete sequenceputative integral membrane protein2e-1890.9