Pre_GI: BLASTP Hits

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Query: NC_004578:4204235:4216904 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4216904, End: 4217758, Length: 855

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:4596040:460881546088154609669855Pseudomonas fluorescens Pf-5, complete genome5,10-methylene-tetrahydrofolate dehydrogenase/cyclohydrolase1e-150531
NC_015410:2351464:236096223609622361816855Pseudomonas mendocina NK-01 chromosome, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase1e-144512
NC_012560:2348202:235702923570292357883855Azotobacter vinelandii DJ, complete genomemethenyltetrahydrofolate cyclohydrolase1e-139496
NC_021150:2348214:235704123570412357895855Azotobacter vinelandii CA6, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase1e-139496
NC_008570:2014151:202735620273562028219864Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeFolD bifunctional protein1e-113409
NC_007645:2204066:220731022073102208194885Hahella chejuensis KCTC 2396, complete genome5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase2e-111402
NC_011138:3182807:320911732091173209971855Alteromonas macleodii 'Deep ecotype', complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase3e-111401
NC_020260:2725201:274226527422652743131867Cronobacter sakazakii Sp291, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase3e-111401
NC_014562:469154:473343473343474209867Pantoea vagans C9-1 chromosome, complete genome5,10-methylene-tetrahydrofolate dehydrogenase3e-111401
NC_013282:1200993:120298112029811203847867Cronobacter turicensis, complete genomeBifunctional protein folD3e-111401
NC_016845:1285435:128707712870771287943867Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase2e-111401
NC_015663:2807574:281348828134882814354867Enterobacter aerogenes KCTC 2190 chromosome, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase6e-111400
NC_015761:520858:523960523960524826867Salmonella bongori NCTC 12419, complete genomebifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase6e-111400
NC_020064:1150982:115550211555021156368867Serratia marcescens FGI94, complete genome5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase5e-111400
NC_013956:1207500:121024512102451211111867Pantoea ananatis LMG 20103 chromosome, complete genomeFolD2e-110399
NC_016816:3373950:338575133857513386617867Pantoea ananatis LMG 5342, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase1e-110399
NC_004631:2366335:238557123855712386437867Salmonella enterica subsp. enterica serovar Typhi Ty2, completemethenyltetrahydrofolate cyclohydrolase1e-110399
NC_011415:600375:600375600375601241867Escherichia coli SE11 chromosome, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase1e-110399
NC_012947:3231893:325555632555563256422867Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase1e-110399
NC_006511:2251022:227098522709852271851867Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCFolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase1e-110399
NC_011147:2247460:226616922661692267035867Salmonella enterica subsp. enterica serovar Paratyphi A strbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase1e-110399
NC_016831:2402893:242133624213362422202867Salmonella enterica subsp. enterica serovar Gallinarum/pullorumFolD bifunctional protein1e-110399
NC_009832:1280938:128483612848361285702867Serratia proteamaculans 568, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))2e-110398
NC_014306:1286248:129115212911521292018867Erwinia billingiae Eb661, complete genomeBifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]1e-109396
NC_015567:1206727:120839712083971209263867Serratia sp. AS9 chromosome, complete genomebifunctional protein folD2e-109395
NC_015566:1206500:120821212082121209078867Serratia sp. AS12 chromosome, complete genomebifunctional protein folD2e-109395
NC_014837:1144500:114627811462781147144867Pantoea sp. At-9b chromosome, complete genomemethylenetetrahydrofolate dehydrogenase (NADP(+))1e-109395
NC_010465:3431500:344568434456843446550867Yersinia pseudotuberculosis YPIII, complete genomeMethenyltetrahydrofolate cyclohydrolase1e-109395
NC_012214:2805297:282230728223072823173867Erwinia pyrifoliae Ep1/96, complete genomeBifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]3e-108391
NC_007712:1182518:118778911877891188661873Sodalis glossinidius str. 'morsitans', complete genome5,10-methylene-tetrahydrofolate dehydrogenase4e-108390
NC_014965:997344:9999809999801000837858Vibrio vulnificus MO6-24/O chromosome I, complete sequencemethylenetetrahydrofolate dehydrogenase (NADP+)2e-103375
NC_017033:1672313:167459916745991675456858Frateuria aurantia DSM 6220 chromosome, complete genome5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase5e-101367
NC_013851:2317091:232898923289892329852864Allochromatium vinosum DSM 180 chromosome, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))1e-99362
NC_012559:978419:984680984680985531852Laribacter hongkongensis HLHK9, complete genomeFolD3e-92338
NC_017514:96911:118628118628119386759Neisseria meningitidis M01-240149 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase1e-90332
NC_004545:499709:504309504309505172864Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomemethylenetetrahydrofolate dehydrogenase1e-88326
NC_011071:1877500:187964618796461880524879Stenotrophomonas maltophilia R551-3, complete genomeMethenyltetrahydrofolate cyclohydrolase3e-86318
NC_015947:1877887:187788718778871878765879Burkholderia sp. JV3 chromosome, complete genomeBifunctional protein folD4e-86318
NC_010943:2091199:209414520941452095023879Stenotrophomonas maltophilia K279a, complete genomeputative FolD bifunctional protein6e-86317
NC_014973:1598429:161845616184561619301846Geobacter sp. M18 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase (NADP(+))6e-83307
NC_017030:6297351:630856863085686309419852Corallococcus coralloides DSM 2259 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase7e-80297
NC_002928:3781657:379431437943143795189876Bordetella parapertussis 12822, complete genomebifunctional protein [includes: methylenetetrahydrofolate dehydrogenase and methylenetetrahydrofolate cyclohydrolase]2e-78292
NC_014394:1325616:133807213380721338932861Gallionella capsiferriformans ES-2 chromosome, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))1e-77289
NC_011758:326366:340046340046340966921Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeMethenyltetrahydrofolate cyclohydrolase6e-75280
NC_008513:343540:346377346377347231855Buchnera aphidicola str. Cc (Cinara cedri), complete genome5,10-methylene-tetrahydrofolate dehydrogenase6e-75280
NC_014652:1758787:177418517741851775054870Caldicellulosiruptor hydrothermalis 108 chromosome, completemethylenetetrahydrofolate dehydrogenase (nadp(+))1e-73276
NC_014721:1028841:103442810344281035297870Caldicellulosiruptor kristjanssonii 177R1B chromosome, completemethylenetetrahydrofolate dehydrogenase (nadp(+))4e-73274
NC_009850:628024:644691644691645554864Arcobacter butzleri RM4018, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase4e-71268
NC_015318:706374:713499713499714341843Hippea maritima DSM 10411 chromosome, complete genomeBifunctional protein folD3e-71268
NC_014219:2491021:249353324935332494396864Bacillus selenitireducens MLS10 chromosome, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))2e-69262
NC_011999:728353:738887738887739735849Macrococcus caseolyticus JCSC5402, complete genomeFolD bifunctional protein2e-69262
NC_011726:1665315:166531516653151666193879Cyanothece sp. PCC 8801, complete genomeMethenyltetrahydrofolate cyclohydrolase3e-69261
NC_015682:379373:394233394233395135903Thermodesulfobacterium sp. OPB45 chromosome, complete genomeBifunctional protein folD8e-69260
NC_015437:918614:938684938684939547864Selenomonas sputigena ATCC 35185 chromosome, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))1e-67256
NC_007168:1923723:194005619400561940913858Staphylococcus haemolyticus JCSC1435, complete genomeFolD bifunctional protein6e-67254
NC_003047:74986:964399643997359921Sinorhizobium meliloti 1021, complete genomePROBABLE BIFUNCTIONAL PROTEIN : METHYLENETETRAHYDROFOLATE DEHYDROGENASE ; METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE4e-67254
NC_004461:746284:750624750624751484861Staphylococcus epidermidis ATCC 12228, complete genomemethenyltetrahydrofolate cyclohydrolase1e-66253
NC_016002:2825017:283661228366122837520909Pseudogulbenkiania sp. NH8B, complete genomemethylenetetrahydrofolate dehydrogenase/cyclohydrolase1e-66253
NC_002976:638799:643140643140644000861Staphylococcus epidermidis RP62A, complete genomemethylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase1e-66253
NC_016642:1913432:193110419311041931997894Pseudovibrio sp. FO-BEG1 chromosome, complete genomeBifunctional protein FolD (Methylenetetrahydrofolate dehydrogenase, Methenyltetrahydrofolate cyclohydrolase)5e-65248
NC_020164:1784223:179857017985701799427858Staphylococcus warneri SG1, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase2e-64246
NC_013192:171000:173268173268174137870Leptotrichia buccalis DSM 1135, complete genomeMethenyltetrahydrofolate cyclohydrolase3e-63242
NC_007796:31691:324763247633315840Methanospirillum hungatei JF-1, complete genomeMethenyltetrahydrofolate cyclohydrolase2e-63242
NC_006055:183823:189963189963190823861Mesoplasma florum L1, complete genomemethylenetetrahydrofolate dehydrogenase2e-63242
NC_014751:772912:805407805407806273867Mycoplasma leachii PG50 chromosome, complete genometetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein1e-62239
NC_014933:2240000:225949322594932260374882Bacteroides helcogenes P 36-108 chromosome, complete genome5,10-methylenetetrahydrofolate dehydrogenase (NADP+); methenyltetrahydrofolate cyclohydrolase4e-62238
NC_009342:841500:842118842118842972855Corynebacterium glutamicum R chromosome, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase6e-62237
NC_015164:1120288:113631111363111137192882Bacteroides salanitronis DSM 18170 chromosome, complete genomeBifunctional protein folD2e-61236
NC_016776:3587983:360433236043323605213882Bacteroides fragilis 638R, complete genomeputative methenyltetrahydrofolate cyclohydrolase2e-61235
NC_003228:3545811:355893935589393559820882Bacteroides fragilis NCTC 9343, complete genomeputative methenyltetrahydrofolate cyclohydrolase2e-61235
NC_006347:3638165:365128936512893652170882Bacteroides fragilis YCH46, complete genomemethylenetetrahydrofolate dehydrogenase2e-61235
NC_012704:1870000:187041018704101871264855Corynebacterium kroppenstedtii DSM 44385, complete genomemethylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase2e-61235
NC_007633:790881:819238819238820092855Mycoplasma capricolum subsp. capricolum ATCC 27343, completemethylene-tetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase4e-61234
NC_010830:1171781:119294911929491193845897Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-61234
NC_014659:3654979:365775036577503658619870Rhodococcus equi 103S, complete genomemethylenetetrahydrofolate dehydrogenase-reductase/formate-tetrahydrofolate ligase9e-61233
NC_018664:239000:241695241695242546852Clostridium acidurici 9a chromosome, complete genomebifunctional 5,10-methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase FolD3e-58225
NC_018000:1852691:185683718568371857706870Sinorhizobium fredii USDA 257 chromosome, complete genomebifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase4e-58224
NC_016783:537717:550897550897551742846Corynebacterium diphtheriae INCA 402 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase2e-57222
NC_008699:3775561:379919837991983800049852Nocardioides sp. JS614, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))6e-57221
NC_016788:527351:536684536684537529846Corynebacterium diphtheriae HC04 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase5e-57221
NC_016782:537412:546746546746547591846Corynebacterium diphtheriae 241 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase5e-57221
NC_016786:533537:546717546717547562846Corynebacterium diphtheriae HC01 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase5e-57221
NC_015519:586000:594783594783595637855Tepidanaerobacter sp. Re1 chromosome, complete genomebifunctional protein folD3e-54212
NC_014820:71565:916759167592523849Cenarchaeum symbiosum A, complete genome5,10-methylene-tetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase4e-51201
NC_014328:4073714:408708040870804087934855Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase4e-49194
NC_016630:28410:305413054131431891Filifactor alocis ATCC 35896 chromosome, complete genomemethylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase4e-47188
NC_014815:5603000:561175656117565612622867Micromonospora sp. L5 chromosome, complete genomemethenyltetrahydrofolate cyclohydrolase3e-45182
NC_006361:3615322:363454736345473635398852Nocardia farcinica IFM 10152, complete genomeputative methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase3e-45182
NC_009380:2548878:257078325707832571703921Salinispora tropica CNB-440 chromosome, complete genomemethenyltetrahydrofolate cyclohydrolase4e-45181
NC_017179:805867:817652817652818524873Clostridium difficile BI1, complete genomebifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase2e-44179
NC_013315:796313:808098808098808970873Clostridium difficile CD196 chromosome, complete genomeFolD bifunctional protein2e-44179
NC_009089:873295:882050882050882922873Clostridium difficile 630, complete genomeFolD bifunctional protein2e-44179
NC_013316:796895:805638805638806510873Clostridium difficile R20291, complete genomeputative FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]2e-44179
NC_014391:3596812:361167336116733612539867Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeMethenyltetrahydrofolate cyclohydrolase2e-44179
NC_009921:4948500:497379749737974974624828Frankia sp. EAN1pec, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))1e-42173
NC_007503:1680513:168399216839921684855864Carboxydothermus hydrogenoformans Z-2901, complete genomemethylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase1e-42173
NC_015578:1038588:104108810410881041939852Treponema primitia ZAS-2 chromosome, complete genomebifunctional protein FolD2e-40166
NC_014376:1217000:123490612349061235760855Clostridium saccharolyticum WM1 chromosome, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP(+))4e-40165
NC_019949:569426:579099579099579932834Mycoplasma cynos C142 complete genomeBifunctional protein FolD7e-40164
NC_011295:929293:943560943560944381822Coprothermobacter proteolyticus DSM 5265, complete genomebifunctional protein FolD5e-38158
NC_015161:36668:564485644857380933Deinococcus proteolyticus MRP chromosome, complete genomeBifunctional protein folD2e-37156
NC_008148:1567703:158882315888231589785963Rubrobacter xylanophilus DSM 9941, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP+)1e-34147
NC_008148:2498000:253095425309542531910957Rubrobacter xylanophilus DSM 9941, complete genomeMethylenetetrahydrofolate dehydrogenase (NADP+)9e-35147
NC_016645:797000:817585817585818523939Pyrobaculum sp. 1860 chromosome, complete genometetrahydrofolate dehydrogenase/cyclohydrolase3e-33142
NC_006156:17637:245542455425459906Borrelia garinii PBi chromosome linear, complete sequencemethylenetetrahydrofolate dehydrogenase3e-33142
NC_015738:2773552:277355227735522774421870Eggerthella sp. YY7918, complete genome5,10-methylene-tetrahydrofolate dehydrogenase3e-32139
NC_013171:1194500:121466112146611215443783Anaerococcus prevotii DSM 20548, complete genometetrahydrofolate dehydrogenase/cyclohydrolase2e-1686.3
NC_016582:5987039:599746959974695998329861Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-1582