Pre_GI: BLASTP Hits

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Query: NC_004578:4061372:4090581 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4090581, End: 4092554, Length: 1974

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:1050532:1064734106473410667011968Janthinobacterium sp. Marseille chromosome, complete genomecytochrome C-type biogenesis protein CcmF0793
NC_015572:2541968:2559059255905925610081950Methylomonas methanica MC09 chromosome, complete genomecytochrome c-type biogenesis protein CcmF0665
NC_015222:1492500:1499815149981515018692055Nitrosomonas sp. AL212 chromosome, complete genomecytochrome c-type biogenesis protein CcmF3e-179629
NC_015731:1381737:1391168139116813932222055Nitrosomonas sp. Is79A3 chromosome, complete genomecytochrome c-type biogenesis protein CcmF3e-178625
NC_015458:1938860:1953481195348119554421962Pusillimonas sp. T7-7 chromosome, complete genomecytochrome c-type biogenesis protein CcmF2e-173609
NC_008344:49039:5868958689606501962Nitrosomonas eutropha C91, complete genomecytochrome c-type biogenesis protein CcmF4e-171602
NC_015061:1251905:1276711127671112786841974Rahnella sp. Y9602 chromosome, complete genomecytochrome c-type biogenesis protein CcmF1e-169597
NC_016818:1291665:1310004131000413119771974Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completec-type cytochrome biogenesis protein CcmF2e-169596
NC_009654:3849774:3855097385509738570341938Marinomonas sp. MWYL1, complete genomecytochrome c-type biogenesis protein CcmF5e-169595
NC_014306:3524980:3524980352498035269351956Erwinia billingiae Eb661, complete genomeCytochrome c biogenesis protein3e-169595
NC_012731:2974745:2989591298959129915431953Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomecytochrome c-type biogenesis protein6e-168591
NC_015497:1287877:1300094130009413021242031Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome c-type biogenesis protein CcmF1e-167590
NC_020541:2551539:2551539255153925535241986Rhodanobacter sp. 2APBS1, complete genomec-type cytochrome biogenesis protein CcmF2e-167589
NC_009092:179226:1992631992632012391977Shewanella loihica PV-4, complete genomecytochrome c-type biogenesis protein CcmF5e-167588
NC_013421:2972269:2979600297960029815551956Pectobacterium wasabiae WPP163, complete genomecytochrome c-type biogenesis protein CcmF6e-167588
NC_017075:2293209:2312043231204323140311989Rubrivivax gelatinosus IL144, complete genomecytochrome c-type biogenesis protein CcmF2e-166586
NC_011283:2323687:2325090232509023270421953Klebsiella pneumoniae 342 chromosome, complete genomecytochrome c-type biogenesis protein CcmF5e-166585
NC_015224:3291736:3294025329402532959921968Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative cytochrome c-type biogenesis protein3e-166585
NC_009648:2252757:2275258227525822772101953Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomecytochrome c-type biogenesis protein2e-166585
NC_016845:3024041:3045219304521930471711953Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,cytochrome c-type biogenesis protein1e-165583
NC_010694:1250841:1268159126815912701141956Erwinia tasmaniensis, complete genomePutative cytochrome c-type biogenesis protein1e-164580
NC_015761:3698520:3706123370612337080541932Salmonella bongori NCTC 12419, complete genomecytochrome c-type biogenesis protein F1e-161570
NC_015761:2227500:2231737223173722336681932Salmonella bongori NCTC 12419, complete genomecytochrome c-type biogenesis protein F21e-161570
NC_016856:2379027:2400540240054024024711932Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scytochrome c-type biogenesis protein1e-160567
NC_016856:4019549:4027607402760740295381932Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scytochrome c-type biogenesis protein1e-160567
NC_016857:2325190:2346703234670323486341932Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cytochrome c-type biogenesis protein CcmF1e-160567
NC_016857:4025767:4035229403522940371601932Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cytochrome c-type biogenesis protein CcmF1e-160567
NC_016810:4027170:4035228403522840371591932Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome C-type biogenesis protein1e-160567
NC_016810:2325190:2346703234670323486341932Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome C-type biogenesis protein1e-160567
NC_003197:4005857:4013915401391540158461932Salmonella typhimurium LT2, complete genomecytochrome c-type biogenesis protein1e-160567
NC_011080:3976441:3984498398449839864291932Salmonella enterica subsp. enterica serovar Newport str. SL254,cytochrome c-type biogenesis protein CcmF1e-160567
NC_011080:2342672:2350759235075923526901932Salmonella enterica subsp. enterica serovar Newport str. SL254,cytochrome c-type biogenesis protein CcmF1e-160567
NC_003197:2327474:2348987234898723509181932Salmonella typhimurium LT2, complete genomecytochrome c-type biogenesis protein1e-160567
NC_016860:2323017:2344530234453023464611932Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome c-type biogenesis protein CcmF1e-160567
NC_016860:4110968:4119026411902641209571932Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome c-type biogenesis protein CcmF1e-160567
NC_016832:687000:6967986967986987291932Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome c-type biogenesis protein CcmF1e-160567
NC_016832:3798475:3807166380716638090971932Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome c-type biogenesis protein CcmF1e-160567
NC_004631:3809678:3818369381836938203001932Salmonella enterica subsp. enterica serovar Typhi Ty2, completecytochrome c-type biogenesis protein F21e-160567
NC_003198:3824187:3832879383287938348101932Salmonella enterica subsp. enterica serovar Typhi str. CT18,cytochrome c-type biogenesis protein F21e-160567
NC_004631:685357:6968446968446987751932Salmonella enterica subsp. enterica serovar Typhi Ty2, completecytochrome c-type biogenesis protein F11e-160567
NC_003198:2297837:2305938230593823078691932Salmonella enterica subsp. enterica serovar Typhi str. CT18,cytochrome c-type biogenesis protein F11e-160567
NC_017046:4025998:4034056403405640359871932Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome C-type biogenesis protein1e-160567
NC_017046:2324554:2346067234606723479981932Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome C-type biogenesis protein1e-160567
NC_016863:3967156:3975214397521439771451932Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1cytochrome c-type biogenesis protein1e-160567
NC_016863:2324293:2348732234873223506631932Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1cytochrome c-type biogenesis protein CcmE1e-160567
NC_011149:3930358:3938407393840739403381932Salmonella enterica subsp. enterica serovar Agona str. SL483,cytochrome c-type biogenesis protein CcmF2e-160566
NC_011149:2294500:2300470230047023024011932Salmonella enterica subsp. enterica serovar Agona str. SL483,cytochrome c-type biogenesis protein CcmF2e-160566
NC_011083:4020000:4028122402812240300531932Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cytochrome c-type biogenesis protein CcmF2e-160566
NC_011083:2375061:2396567239656723984981932Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cytochrome c-type biogenesis protein CcmF2e-160566
NC_006511:3794017:3801978380197838039091932Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcytochrome c-type biogenesis protein F15e-160565
NC_006511:682863:6943506943506962811932Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcytochrome c-type biogenesis protein F15e-160565
NC_011147:3789696:3797657379765737995881932Salmonella enterica subsp. enterica serovar Paratyphi A strcytochrome c-type biogenesis protein F25e-160565
NC_011147:682897:6943846943846963151932Salmonella enterica subsp. enterica serovar Paratyphi A strcytochrome c-type biogenesis protein F15e-160565
NC_011205:2462025:2470128247012824720591932Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cytochrome c-type biogenesis protein CcmF4e-160565
NC_011205:4038884:4046940404694040488711932Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cytochrome c-type biogenesis protein CcmF4e-160565
NC_010102:683444:6949056949056968361932Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-160565
NC_010102:3955479:3962797396279739647281932Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-160565
NC_010067:632683:6453356453356472661932Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-160564
NC_006905:2355290:2363271236327123652021932Salmonella enterica subsp. enterica serovar Choleraesuis strcytochrome c-type biogenesis protein2e-159563
NC_006905:3942753:3954659395465939565901932Salmonella enterica subsp. enterica serovar Choleraesuis strcytochrome c-type biogenesis protein2e-159563
NC_012125:1517925:1529412152941215313431932Salmonella enterica subsp. enterica serovar Paratyphi C straincytochrome c-type biogenesis protein2e-159563
NC_012125:3941974:3949676394967639516071932Salmonella enterica subsp. enterica serovar Paratyphi C straincytochrome c-type biogenesis protein2e-159563
NC_011094:2348491:2354765235476523566961932Salmonella enterica subsp. enterica serovar Schwarzengrund strcytochrome c-type biogenesis protein CcmF2e-159563
NC_011094:3887648:3895705389570538976361932Salmonella enterica subsp. enterica serovar Schwarzengrund strcytochrome c-type biogenesis protein CcmF2e-159563
NC_011274:2325840:2333951233395123358821932Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cytochrome c-type biogenesis protein F18e-159561
NC_011274:3799696:3808386380838638103171932Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cytochrome c-type biogenesis protein F18e-159561
NC_011294:2334979:2343082234308223450131932Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome c-type biogenesis protein F18e-159561
NC_011294:3880500:3888571388857138905021932Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome C-type biogenesis protein8e-159561
NC_010067:3753971:3762732376273237646631932Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-159560
NC_016147:1825827:1825827182582718277491923Pseudoxanthomonas spadix BD-a59 chromosome, complete genomec-type cytochrome biogenesis membrane protein1e-158560
NC_016831:3779611:3789303378930337912341932Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcytochrome c-type biogenesis protein F12e-158559
NC_016831:687549:6986716986717006021932Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcytochrome c-type biogenesis protein F12e-158559
NC_010170:3944228:3982760398276039840701311Bordetella petrii, complete genomecytochrome c-type biogenesis protein CcmF1e-98361
NC_013421:2972269:2985754298575429876281875Pectobacterium wasabiae WPP163, complete genomecytochrome c-type biogenesis protein CcmF3e-95350
NC_018643:1309804:1312645131264513145251881Alpha proteobacterium HIMB5 chromosome, complete genomecytochrome c assembly protein3e-84313
NC_012416:205925:2268772268772289702094Wolbachia sp. wRi, complete genomeCytochrome c biogenesis factor3e-82306
NC_012026:1034724:1048147104814710500691923Anaplasma marginale str. Florida, complete genomecytochrome c-type biogenesis protein (ccmF)6e-82305
NC_004842:1031020:1044334104433410462561923Anaplasma marginale str. St. Maries, complete genomecytochrome c-type biogenesis protein2e-81303
NC_014623:4426416:4447458444745844494852028Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecytochrome c-type biogenesis protein CcmF3e-76286
NC_020126:6019850:6019850601985060218682019Myxococcus stipitatus DSM 14675, complete genomecytochrome c-type biogenesis protein CcmF5e-75282
NC_008095:3785848:3806332380633238083532022Myxococcus xanthus DK 1622, complete genomecytochrome c-type biogenesis protein CcmF4e-74279
NC_016943:1810417:1814920181492018169682049Blastococcus saxobsidens DD2, complete genomecytochrome c-type biogenesis protein CcmF1e-73278
NC_002978:200878:2179062179062200322127Wolbachia endosymbiont of Drosophila melanogaster, complete genomecytochrome c-type biogenesis protein CcmF, putative6e-73275
NC_015387:1965711:1985812198581219877761965Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c assembly protein2e-71270
NC_014314:404315:4062534062534081991947Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completecytochrome c assembly protein8e-68258
NC_009488:1430693:1444619144461914465051887Orientia tsutsugamushi str. Boryong, complete genomecytochrome c-type biogenesis3e-60233
NC_015161:927152:9428969428969449262031Deinococcus proteolyticus MRP chromosome, complete genomecytochrome c assembly protein3e-58226
NC_017955:1584269:1584269158426915861911923Modestobacter marinus, complete genomecytochrome c-type biogenesis protein CcmF3e-57223
NC_012779:3016327:3039196303919630408901695Edwardsiella ictaluri 93-146, complete genomecytochrome c-type biogenesis protein CcmF, putative5e-55216
NC_007955:1108000:1124494112449411255911098Methanococcoides burtonii DSM 6242, complete genomecytochrome c assembly protein2e-33144
NC_018876:1061682:1080959108095910820261068Methanolobus psychrophilus R15 chromosome, complete genomecytochrome c assembly protein2e-31137
NC_014002:631649:6325756325756336241050Methanohalophilus mahii DSM 5219 chromosome, complete genomecytochrome c assembly protein3e-30134
NC_008818:1483483:1519371151937115224003030Hyperthermus butylicus DSM 5456, complete genomehypothetical protein2e-1688.2