Pre_GI: BLASTP Hits

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Query: NC_004578:4061372:4080432 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4080432, End: 4082498, Length: 2067

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4353000:4368982436898243710122031Methylobacterium extorquens DM4, complete genomeefflux transporter permease, aromatic acid exporter family1e-73278
NC_015138:2069739:2094280209428020964242145Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeFusaric acid resistance protein conserved region3e-49197
NC_021066:1712905:1756689175668917585961908Raoultella ornithinolytica B6, complete genomefusaric acid resistance domain protein3e-46187
NC_014306:4376012:4377292437729243793642073Erwinia billingiae Eb661, complete genomePutative fusaric acid resistance protein2e-40167
NC_014562:1402863:1417694141769414197392046Pantoea vagans C9-1 chromosome, complete genomeputative ArAE family transporter3e-38160
NC_010943:2815865:2833090283309028350601971Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane fusaric acid resistance efflux protein8e-38159
NC_020541:2264521:2264521226452122655281008Rhodanobacter sp. 2APBS1, complete genome2e-33144
NC_010501:1286971:1287225128722512892552031Pseudomonas putida W619, complete genomeFusaric acid resistance protein conserved region5e-24113
NC_011000:1262324:1284579128457912867742196Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative fusaric acid resistance transporter protein1e-21105
NC_014722:1084616:1105620110562011078272208Burkholderia rhizoxinica HKI 454, complete genomefusaric acid resistance protein fusB / fusaric acid resistance protein fusC / fusaric acid resistance6e-21103
NC_010676:897801:9111649111649133322169Burkholderia phytofirmans PsJN chromosome 2, complete sequenceFusaric acid resistance protein conserved region2e-1998.2
NC_007498:3399478:3397301339730133994812181Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein5e-1996.7
NC_003143:4105754:4120160412016041221151956Yersinia pestis CO92, complete genomehypothetical protein4e-1894
NC_010465:522649:5370355370355389901956Yersinia pseudotuberculosis YPIII, complete genomeFusaric acid resistance protein conserved region4e-1894
NC_008149:3966586:3967986396798639699411956Yersinia pestis Nepal516, complete genomemembrane protein4e-1894
NC_006155:4210606:4212342421234242142971956Yersinia pseudotuberculosis IP 32953, complete genomeputative Efflux Transporter (PET) family protein4e-1894
NC_008150:4140804:4155200415520041571551956Yersinia pestis Antiqua, complete genomehypothetical protein4e-1894
NC_005810:4381182:4382917438291743848721956Yersinia pestis biovar Microtus str. 91001, complete genomep-hydroxybenzoic acid efflux subunit AaeB4e-1894
NC_004088:179775:1811751811751831301956Yersinia pestis KIM, complete genomehypothetical protein4e-1894
NC_010159:1208699:1210440121044012123951956Yersinia pestis Angola, complete genomep-hydroxybenzoic acid efflux pump subunit AaeB4e-1894
NC_010634:4150763:4152499415249941544541956Yersinia pseudotuberculosis PB1/+, complete genomefusaric acid resistance protein region4e-1894
NC_017265:4171500:4172122417212241740771956Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,p-hydroxybenzoic acid efflux pump subunit AaeB4e-1894
NC_017168:1729922:1744328174432817462831956Yersinia pestis A1122 chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeB4e-1894
NC_017154:3997810:4012216401221640141711956Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-1894
NC_014029:4057696:4072102407210240740571956Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-1894
NC_009708:483253:4978434978434997981956Yersinia pseudotuberculosis IP 31758 chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeB4e-1894
NC_009381:321577:3359843359843379391956Yersinia pestis Pestoides F chromosome, complete genomep-hydroxybenzoic acid efflux subunit AaeB4e-1894
NC_017160:3986844:3988244398824439901991956Yersinia pestis D182038 chromosome, complete genomemembrane protein6e-1893.2
NC_013716:4824541:4824541482454148265081968Citrobacter rodentium ICC168, complete genomep-hydroxybenzoic acid efflux pump subunit B1e-1792
NC_016027:376669:3770913770913790912001Gluconacetobacter xylinus NBRC 3288, complete genomefusaric acid resistance protein6e-1583.2
NC_015224:4028150:4028150402815040301051956Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,p-hydroxybenzoic acid efflux subunit AaeB2e-1481.6
NC_007952:1293024:1309950130995013111851236Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein6e-1376.6
NC_014837:1873020:1875112187511218771122001Pantoea sp. At-9b chromosome, complete genomefusaric acid resistance protein5e-1376.6
NC_013209:2248119:2289027228902722908621836Acetobacter pasteurianus IFO 3283-01, complete genomefusaric acid resistance protein7e-1376.3
NC_010125:763141:7803597803597824312073Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein3e-1274.3
NC_016901:5130147:5164668516466851667402073Shewanella baltica OS678 chromosome, complete genomefusaric acid resistance protein4e-1273.9
NC_009997:5188221:5224046522404652261182073Shewanella baltica OS195, complete genomeFusaric acid resistance protein conserved region4e-1273.9
NC_011663:5016488:5034333503433350364052073Shewanella baltica OS223 chromosome, complete genomefusaric acid resistance protein5e-1273.6
NC_009665:5072413:5108133510813351102682136Shewanella baltica OS185 chromosome, complete genomefusaric acid resistance protein region6e-1273.2
NC_017249:263873:2714922714922734561965Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0964.3
NC_011365:1969198:2000256200025620024842229Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomefusaric acid resistance protein3e-0964.3
NC_011979:773673:7933787933787953451968Geobacter sp. FRC-32, complete genomeFusaric acid resistance protein conserved region3e-0654.3