Pre_GI: BLASTP Hits

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Query: NC_004578:3817330:3832757 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3832757, End: 3832963, Length: 207

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2234851:223824722382472238453207Pseudomonas fluorescens Pf-5, complete genometail protein X-related protein6e-25112
NC_005773:2177184:218174521817452181951207Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, tail protein X7e-23105
NC_017986:4124335:412855441285544128760207Pseudomonas putida ND6 chromosome, complete genomepyocin R2 PP, tail component protein1e-1995.5
NC_012560:3303961:330997833099783310172195Azotobacter vinelandii DJ, complete genomePhage tail X protein3e-1890.5
NC_021150:3303959:330997633099763310170195Azotobacter vinelandii CA6, complete genomePhage tail X protein3e-1890.5
NC_016830:4999946:501752350175235017693171Pseudomonas fluorescens F113 chromosome, complete genomeP2-like prophage tail protein X9e-1889
NC_017033:1089579:109366110936611093867207Frateuria aurantia DSM 6220 chromosome, complete genomeP2-like prophage tail protein X1e-1788.6
NC_008390:2018201:203705720370572037263207Burkholderia cepacia AMMD chromosome 1, complete sequencephage tail X family protein9e-1785.5
NC_015381:3091500:311547331154733115679207Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage tail X family protein4e-1683.2
NC_012724:3070386:308474130847413084947207Burkholderia glumae BGR1 chromosome 1, complete genomePhage tail X family protein5e-1683.2
NC_015381:3457784:347451634745163474722207Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage tail X family protein1e-1581.6
NC_015381:2109500:211340021134002113606207Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage tail X family protein2e-1580.9
NC_015733:1976752:198111219811121981276165Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, tail component protein2e-1271.2
NC_017047:1551836:157276915727691572972204Rahnella aquatilis HX2 chromosome, complete genomeTail protein X (GpX)1e-0755.5
NC_016818:1605918:162602016260201626223204Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeP2-like prophage tail protein X1e-0755.5
NC_012416:753500:756980756980757186207Wolbachia sp. wRi, complete genometail protein X, putative2e-0754.7
NC_014306:103545:124892124892125095204Erwinia billingiae Eb661, complete genomePhage tail protein X8e-0752.4
NC_012724:147454:147812147812148018207Burkholderia glumae BGR1 chromosome 1, complete genomePhage tail protein3e-0650.4
NC_016845:1773416:179080617908061791009204Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-0650.4
NC_014228:3022903:304225630422563042459204Xenorhabdus nematophila ATCC 19061, complete genomeTail protein X (GpX)7e-0649.3
NC_020209:3262000:327978032797803279986207Pseudomonas poae RE*1-1-14, complete genomephage P2 tail gpX-like protein8e-0649.3