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Query: NC_004578:3597083:3608136 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3608136, End: 3608651, Length: 516

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1571305:160306116030611603570510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-30132
NC_003143:2778494:278961227896122790115504Yersinia pestis CO92, complete genomehypothetical protein1e-30132
NC_010634:2894631:290057429005742901083510Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-30132
NC_008150:2207198:222132722213272221836510Yersinia pestis Antiqua, complete genomehypothetical protein1e-30132
NC_004088:1851500:188198018819801882489510Yersinia pestis KIM, complete genomehypothetical protein1e-30132
NC_010159:1794000:180365318036531804162510Yersinia pestis Angola, complete genomehypothetical protein1e-30132
NC_008149:2337336:235146523514652351974510Yersinia pestis Nepal516, complete genomehypothetical protein1e-30132
NC_006155:2979500:298264429826442983153510Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-30132
NC_017168:2941938:297231529723152972824510Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-30132
NC_017160:2787637:281945028194502819959510Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-30132
NC_017154:2774955:278908427890842789593510Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-30132
NC_014029:2729832:274193427419342742443510Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-30132
NC_009381:2138625:214181821418182142327510Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-30132
NC_014306:2476316:248836824883682488877510Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein2e-30131
NC_013283:113660:126026126026126508483Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein6e-23106
NC_011145:4365730:437817343781734378658486Anaeromyxobacter sp. K, complete genomehypothetical protein2e-1478.2
NC_008095:6253610:627020762702076270671465Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-1375.9