Pre_GI: BLASTP Hits

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Query: NC_004578:2797493:2803874 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2803874, End: 2804389, Length: 516

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:282565:288454288454288972519Pseudomonas aeruginosa UCBPP-PA14, complete genomeSecreted protein Hcp1e-44178
NC_008027:5576458:559406755940675594585519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A9e-44176
NC_008027:4889662:491355949135594914077519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1C4e-43173
NC_008027:558507:558507558507559025519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1B4e-43173
NC_008027:896000:896182896182896700519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A4e-43173
NC_007492:2310793:233099623309962331511516Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF7961e-42171
NC_008027:3844355:387980238798023880302501Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 2A9e-41166
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein7e-40162
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein3e-39160
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family8e-33139
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein9e-31132
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp1e-30132
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp2e-30131
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp4e-30130
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-30130
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein4e-30130
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein4e-30130
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein4e-30130
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein4e-30130
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family3e-30130
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family3e-30130
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein3e-30130
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-29129
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-29129
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-29129
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)1e-29129
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-29129
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-29129
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-29129
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp1e-29129
NC_002947:4604582:461052046105204611035516Pseudomonas putida KT2440, complete genomehcp protein6e-30129
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein1e-29129
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-29129
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein1e-29129
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein1e-29129
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein1e-29129
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector2e-29128
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein8e-29126
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein8e-29126
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068871e-28125
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family1e-28125
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family4e-28124
NC_014166:1751906:175350717535071754031525Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHcp1 family type VI secretion system effector6e-28123
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector2e-27121
NC_007517:306508:312033312033312518486Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF7963e-24110
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp1e-23109
NC_009349:78000:780487804810171623669Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete4e-21100
NC_014306:642152:650001650001650492492Erwinia billingiae Eb661, complete genomeVirulence factor for secretion apparatus6e-1993.2
NC_014118:1171411:119129111912911191776486Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion system effector, Hcp1 family2e-1788.6
NC_016590:1183470:120668812066881207173486Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein1e-1685.9
NC_007348:2011957:201195720119572012442486Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF7961e-1685.9
NC_012721:1395417:141887514188751419360486Burkholderia glumae BGR1 chromosome 2, complete genomeHemolysin-coregulated protein4e-1684
NC_008563:3119284:312300631230063123497492Escherichia coli APEC O1, complete genomeputative hemolysin-coregulated protein9e-1682.8
NC_010067:51000:608906089061372483Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1582.4
NC_016445:984856:986816986816987145330Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein9e-1579.3
NC_012962:3568046:359502135950213595512492Photorhabdus asymbiotica, complete genomehypothetical protein1e-1479
NC_010501:3575726:359724435972443597747504Pseudomonas putida W619, complete genometype VI secretion system effector, Hcp1 family2e-1478.2
NC_016612:5600177:561645556164555616946492Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system effector3e-1477.8
NC_012962:3568046:358995535899553590446492Photorhabdus asymbiotica, complete genomehypothetical protein4e-1477.4
NC_017060:125480:127189127189127680492Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system effector6e-1476.6
NC_015062:130359:130359130359130850492Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion system effector, Hcp1 family6e-1476.6
NC_010067:892729:919954919954920442489Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1375.5
NC_015968:2195645:223124322312432231725483Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector2e-1375.1
NC_012731:2302974:230468523046852305176492Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-1374.7
NC_009648:1487692:148940314894031489894492Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-1374.7
NC_016835:128757:136918136918137409492Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,type VI secretion system effector4e-1374.3
NC_020181:969599:989229989229989720492Enterobacter aerogenes EA1509E, complete genomePutative cytoplasmic protein USSDB7A5e-1373.9
NC_005126:4919689:492595549259554926446492Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-1373.9
NC_010634:3720214:373921637392163739707492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector5e-1373.6
NC_008150:844727:876138876138876629492Yersinia pestis Antiqua, complete genomehypothetical protein5e-1373.6
NC_010465:893921:912664912664913155492Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system effector, Hcp1 family5e-1373.6
NC_008149:3556999:357602935760293576520492Yersinia pestis Nepal516, complete genomehypothetical protein5e-1373.6
NC_008149:2802392:282093128209312821422492Yersinia pestis Nepal516, complete genomehypothetical protein5e-1373.6
NC_004088:3689000:370815337081533708644492Yersinia pestis KIM, complete genomehypothetical protein5e-1373.6
NC_005810:1467772:149117914911791491670492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)5e-1373.6
NC_003143:1630000:166227416622741662765492Yersinia pestis CO92, complete genomehypothetical protein5e-1373.6
NC_005810:3917254:393870739387073939198492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)5e-1373.6
NC_004088:2966331:298486729848672985358492Yersinia pestis KIM, complete genomehypothetical protein5e-1373.6
NC_006155:1756000:178167217816721782163492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-1373.6
NC_003143:1059580:108004610800461080537492Yersinia pestis CO92, complete genomehypothetical protein5e-1373.6
NC_008150:317903:337604337604338095492Yersinia pestis Antiqua, complete genomehypothetical protein5e-1373.6
NC_010634:1755548:178190317819031782394492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector5e-1373.6
NC_006155:3805640:382613538261353826626492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-1373.6
NC_017265:809943:828705828705829196492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-1373.6
NC_017265:2586729:260526826052682605759492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-1373.6
NC_017168:3977767:399630639963063996797492Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-1373.6
NC_017168:3286:247372473725228492Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-1373.6
NC_017160:1628500:165435116543511654842492Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-1373.6
NC_017154:902739:922440922440922931492Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-1373.6
NC_017154:1644404:167385716738571674348492Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-1373.6
NC_014029:961522:980295980295980786492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-1373.6
NC_014029:1702338:173178417317841732275492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-1373.6
NC_009708:874770:893523893523894014492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-1373.6
NC_009708:2788855:283854128385412839032492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-1373.6
NC_009381:588137:606893606893607384492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1373.6
NC_009381:1682000:170220017022001702691492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1373.6
NC_013421:553193:570784570784571158375Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family8e-1373.2
NC_009708:915814:938848938848939339492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein8e-1373.2
NC_012917:1840172:187440618744061874891486Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype VI secretion system effector, Hcp1 family7e-1373.2
CP002516:3863932:387102238710223871504483Escherichia coli KO11, complete genometype VI secretion system effector, Hcp1 family1e-1272.8
CP002185:234719:240399240399240881483Escherichia coli W, complete genomeHcp-related protein1e-1272.8
NC_016822:246715:252419252419252901483Shigella sonnei 53G, complete genometype VI secretion system effector1e-1272.8
NC_016902:3863932:387102238710223871504483Escherichia coli KO11FL chromosome, complete genometype VI secretion system effector1e-1272.8
NC_006155:3333303:334425333442533344732480Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-1272.8
NC_010465:1427170:143539214353921435871480Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system effector, Hcp1 family1e-1272.8
NC_010634:3250810:326173732617373262216480Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector1e-1272.8
NC_009708:1403434:140995514099551410434480Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1272.8
NC_007712:254000:263569263569264048480Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-1372.8
NC_010159:409500:420721420721421200480Yersinia pestis Angola, complete genomehypothetical protein1e-1272.4
NC_008150:2574794:258555725855572586036480Yersinia pestis Antiqua, complete genomehypothetical protein1e-1272.4
NC_004088:1510467:151755915175591518038480Yersinia pestis KIM, complete genomehypothetical protein1e-1272.4
NC_008149:1440371:144747914474791447958480Yersinia pestis Nepal516, complete genomehypothetical protein1e-1272.4
NC_012912:844339:852670852670853137468Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family1e-1272.4
NC_003143:3191246:320198932019893202468480Yersinia pestis CO92, complete genomehypothetical protein1e-1272.4
NC_005810:3021913:303299430329943033473480Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)1e-1272.4
NC_014029:3171627:317871931787193179198480Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-1272.4
NC_010067:2529750:255257725525772553068492Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1272.4
NC_017265:2940539:295248629524862952965480Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-1272.4
NC_017168:2535732:254647525464752546954480Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-1272.4
NC_017160:3094768:310368631036863104165480Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-1272.4
NC_017154:2876545:288723328872332887712480Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-1272.4
NC_013850:4829455:483727848372784837769492Klebsiella variicola At-22 chromosome, complete genometype VI secretion system effector, Hcp1 family2e-1271.6
NC_010159:3120642:314184631418463142337492Yersinia pestis Angola, complete genomehypothetical protein3e-1271.2
NC_010159:172469:181740181740182231492Yersinia pestis Angola, complete genomehypothetical protein3e-1271.2
NC_013956:4579759:459389845938984594425528Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein7e-1270.1
NC_009832:1946401:196478119647811965272492Serratia proteamaculans 568, complete genomeprotein of unknown function DUF7968e-1269.7
NC_004547:1174650:119865011986501199129480Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1168.6
NC_013421:4006085:401413340141334014612480Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family2e-1168.2
NC_016831:1905289:191014319101431910622480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1167.4
NC_011294:1085447:110554011055401106019480Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-1167.4
NC_011205:1186097:120617012061701206649480Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853HNH endonuclease domain-containing protein4e-1167.4
NC_011274:1094379:111445111144511114930480Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-1167
NC_011283:4966471:497703349770334977512480Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system effector5e-1167
NC_011740:1991941:200847520084752008954480Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein (Hcp-like), similar to Aec327e-1166.6
NC_005810:1230976:123636512363651236937573Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-1166.6
NC_003143:3115933:312313031231303123702573Yersinia pestis CO92, complete genomehypothetical protein6e-1166.6
NC_008150:2822689:282940228294022829974573Yersinia pestis Antiqua, complete genomehypothetical protein6e-1166.6
NC_004088:1265730:127745612774561278028573Yersinia pestis KIM, complete genomehypothetical protein6e-1166.6
NC_008149:1195614:120734012073401207912573Yersinia pestis Nepal516, complete genomemembrane protein6e-1166.6
NC_014029:3245778:325750432575043258076573Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-1166.6
NC_017154:3188795:320052132005213201093573Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-1166.6
NC_017168:2626996:263872226387222639294573Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-1166.6
NC_008027:2051821:206156020615602062045486Pseudomonas entomophila L48, complete genomehypothetical protein2e-1065.1
NC_012962:1041518:106109010610901061569480Photorhabdus asymbiotica, complete genomehypothetical protein3e-1064.7
NC_011149:1077589:109348810934881093967480Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion system effector, Hcp1 family3e-1064.7
NC_013421:2453078:246131024613102461789480Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family5e-1063.9
NC_012962:1827000:184728718472871847766480Photorhabdus asymbiotica, complete genomesimilar to hcp protein6e-1063.5
NC_012962:1041518:106320410632041063683480Photorhabdus asymbiotica, complete genomehypothetical protein1e-0962.4
NC_012912:647369:656620656620657168549Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family2e-0962
NC_015061:2770856:278352327835232784008486Rahnella sp. Y9602 chromosome, complete genometype VI secretion system effector, Hcp1 family2e-0962
NC_012962:869295:891705891705892184480Photorhabdus asymbiotica, complete genomehypothetical protein3e-0961.2
NC_010627:127968:140978140978141478501Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetype VI secretion system effector, Hcp1 family2e-0858.9
NC_009792:4017510:403007840300784030329252Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-0650.1
NC_016445:984856:986628986628986849222Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein7e-0650.1