Pre_GI: BLASTP Hits

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Query: NC_004578:212468:236402 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 236402, End: 237685, Length: 1284

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:3995445:4016833401683340181101278Salmonella enterica subsp. enterica serovar Typhimurium strL-lysine 6-monooxygenase8e-77288
NC_011751:3453683:3486493348649334878301338Escherichia coli UMN026 chromosome, complete genomeL-lysine 6-monooxygenase3e-76286
NC_004431:3409389:3463394346339434647311338Escherichia coli CFT073, complete genomeIucD protein3e-76286
NC_004337:3590323:3825261382526138265981338Shigella flexneri 2a str. 301, complete genomelysine:N6-hydroxylase1e-75283
NC_010465:868402:8899178899178912451329Yersinia pseudotuberculosis YPIII, complete genomeL-lysine 6-monooxygenase (NADPH)7e-75281
NC_005810:3917254:3915929391592939172571329Yersinia pestis biovar Microtus str. 91001, complete genomeputative siderophore biosynthesis protein IucD7e-75281
NC_006155:3846315:3848060384806038493881329Yersinia pseudotuberculosis IP 32953, complete genomeputative siderophore biosynthesis protein IucD7e-75281
NC_009708:853063:8707668707668720941329Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeaerobactin siderophore biosynthesis protein IucD7e-75281
NC_017168:3286:1961196132891329Yersinia pestis A1122 chromosome, complete genomeputative siderophore biosynthesis protein IucD6e-75281
NC_011745:4862218:4860884486088448622211338Escherichia coli ED1a chromosome, complete genomeL-lysine 6-monooxygenase1e-74280
NC_004463:2262467:2304988230498823066101623Bradyrhizobium japonicum USDA 110, complete genomeprobable oxygenase3e-72272
NC_017249:7917586:7971578797157879730801503Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-72272
NC_020211:4484817:4493764449376444950591296Serratia marcescens WW4, complete genomeL-lysine 6-monooxygenase5e-71268
NC_014315:1396990:1408070140807014093531284Nitrosococcus watsoni C-113 chromosome, complete genomel-lysine 6-monooxygenase6e-70265
NC_007484:2045500:2050776205077620520561281Nitrosococcus oceani ATCC 19707, complete genomeL-lysine 6-monooxygenase (NADPH)1e-69264
NC_015138:4666544:4676244467624446776171374Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeL-lysine 6-monooxygenase (NADPH)2e-68260
NC_008752:4665699:4675388467538846767611374Acidovorax avenae subsp. citrulli AAC00-1, complete genomeL-lysine 6-monooxygenase (NADPH)2e-68259
NC_014310:1822751:1843726184372618451081383Ralstonia solanacearum PSI07 megaplasmid, complete sequencel-lysine 6-monooxygenase (iucd)2e-66253
NC_010474:19256:2711227112284131302Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequencesiderophore biosynthesis protein; N-monooxygenase8e-66251
NC_014532:2108897:2120960212096021223301371Halomonas elongata DSM 2581, complete genomeL-lysine 6-monooxygenase (NADPH)9e-60231
NC_003155:7453994:7464582746458274660001419Streptomyces avermitilis MA-4680, complete genomemonooxygenase5e-58225
NC_005773:4282840:4304725430472543060891365Pseudomonas syringae pv. phaseolicola 1448A, complete genomesiderophore biosynthesis protein6e-58225
NC_013929:7606749:7619890761989076213261437Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-57222
NC_018750:1835500:1838273183827318396851413Streptomyces venezuelae ATCC 10712, complete genomeSiderophore biosynthesis protein, monooxygenase1e-56221
NC_016582:9422650:9433058943305894345121455Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative monooxygenase1e-55217
NC_004193:375416:4044964044964058001305Oceanobacillus iheyensis HTE831, complete genomemonooxygenase3e-55216
NC_015696:517941:5166285166285179441317Francisella sp. TX077308 chromosome, complete genomesiderophore biosynthesis protein, monooxygenase1e-54214
NC_008260:2340824:2378711237871123800031293Alcanivorax borkumensis SK2, complete genomeL-ornithine N5-oxygenase8e-55214
NC_002928:3715492:3720307372030737216921386Bordetella parapertussis 12822, complete genomealcaligin biosynthesis enzyme8e-55214
NC_002929:2589202:2597771259777125991561386Bordetella pertussis Tohama I, complete genomealcaligin biosynthesis enzyme8e-55214
NC_017223:2618535:2622407262240726237921386Bordetella pertussis CS chromosome, complete genomealcaligin biosynthesis enzyme8e-55214
NC_002927:4130697:4135574413557441369591386Bordetella bronchiseptica RB50, complete genomealcaligin biosynthesis enzyme7e-55214
NC_021177:1736854:1757985175798517594121428Streptomyces fulvissimus DSM 40593, complete genomeL-lysine 6-monooxygenase (NADPH)6e-54211
NC_010336:996661:9953489953489966641317Francisella philomiragia subsp. philomiragia ATCC 25017, completeL-lysine 6-monooxygenase (NADPH)9e-54211
NC_005966:2110549:2112007211200721134191413Acinetobacter sp. ADP1, complete genomeputative lysine/ornithine N-monooxygenase3e-53209
NC_010572:6463939:6476999647699964784261428Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative monooxygenase4e-53209
NC_015953:1581542:1603654160365416051111458Streptomyces sp. SirexAA-E chromosome, complete genomeL-lysine 6-monooxygenase (NADPH)5e-53208
NC_005966:2699483:2709355270935527106951341Acinetobacter sp. ADP1, complete genomeputative siderophore biosynthesis protein; putative Lysine/ornithine N-monooxygenase5e-53208
NC_015957:8103472:8113171811317181147271557Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative monooxygenase6e-52205
NC_016114:5539021:5552053555205355534861434Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeL-lysine 6-monooxygenase8e-52204
NC_008752:4086283:4109661410966141110191359Acidovorax avenae subsp. citrulli AAC00-1, complete genomeL-lysine 6-monooxygenase (NADPH)2e-48193
NC_014323:2680085:2682281268228126836121332Herbaspirillum seropedicae SmR1 chromosome, complete genomeL-ornithine N5-monooxygenase5e-48192
NC_015138:4103457:4123820412382041251781359Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeL-lysine 6-monooxygenase (NADPH)6e-48191
NC_013960:1808523:1833778183377818350791302Nitrosococcus halophilus Nc4 chromosome, complete genomeL-lysine 6-monooxygenase (NADPH)8e-48191
NC_009512:2238437:2239808223980822411421335Pseudomonas putida F1, complete genomeLysine/ornithine N-monooxygenase-like protein2e-45183
NC_008278:2813362:2818655281865528199861332Frankia alni ACN14a, complete genomepeptide monooxygenase3e-45182
NC_010612:4654936:4669337466933746708211485Mycobacterium marinum M, complete genomemonooxygenase3e-44179
NC_012214:474359:4837194837194850471329Erwinia pyrifoliae Ep1/96, complete genomeL-lysine 6-monooxygenase (NADPH)7e-44178
NC_009921:3551036:3599273359927336005921320Frankia sp. EAN1pec, complete genomeL-lysine 6-monooxygenase (NADPH)1e-43177
NC_010995:2123909:2134875213487521362121338Cellvibrio japonicus Ueda107, complete genomehypothetical protein7e-43175
NC_020211:1655826:1668039166803916692831245Serratia marcescens WW4, complete genomeL-lysine 6-monooxygenase1e-42174
NC_014640:2754894:2776640277664027779261287Achromobacter xylosoxidans A8 chromosome, complete genomeL-ornithine 5-monooxygenase2e-42173
NC_009921:7249249:7253435725343572548261392Frankia sp. EAN1pec, complete genomeL-lysine 6-monooxygenase (NADPH)6e-42172
NC_016830:2168523:2186808218680821881421335Pseudomonas fluorescens F113 chromosome, complete genomeprotein PvdA9e-37154
NC_007963:2644930:2653083265308326543481266Chromohalobacter salexigens DSM 3043, complete genomelysine N6-hydroxylase/L-ornithine N5-oxygenase family protein4e-36152
NC_004129:5723787:5749720574972057510631344Pseudomonas fluorescens Pf-5, complete genomelysine N6-hydroxylase/L-ornithine N5-oxygenase family protein4e-36152
NC_007164:2068678:2079635207963520810531419Corynebacterium jeikeium K411, complete genomeputative L-ornithine N5-oxygenase2e-33143
NC_015859:3177199:3206020320602032071531134Corynebacterium variabile DSM 44702 chromosome, complete genomeL-lysine 6-monooxygenase2e-31137
NC_011894:6888562:6936186693618669374391254Methylobacterium nodulans ORS 2060, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase4e-0859.7
NC_016593:596500:6097886097886108341047Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeputative oxidoreductase czcO-like protein2e-0654.3
NC_006510:591339:6061656061656072111047Geobacillus kaustophilus HTA426, complete genomepotassium transporter (Trk family)2e-0654.3