Pre_GI: BLASTP Hits

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Query: NC_004578:212468:232469 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 232469, End: 232945, Length: 477

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:141910:142603142603142974372Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-62238
NC_010501:5735656:574370157437015744024324Pseudomonas putida W619, complete genomehypothetical protein1e-26119
NC_015379:4249238:425479142547914254988198Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-1890.9
NC_021150:3416450:343195934319593432429471Azotobacter vinelandii CA6, complete genomehypothetical protein6e-1786.3
NC_012560:3416451:343196034319603432430471Azotobacter vinelandii DJ, complete genomehypothetical protein6e-1786.3
NC_013730:4440943:444259244425924443017426Spirosoma linguale DSM 74, complete genomehypothetical protein3e-1373.9
NC_008312:2264832:228546722854672285946480Trichodesmium erythraeum IMS101, complete genomehypothetical protein4e-1063.9
NC_014032:269844:285581285581286039459Salinibacter ruber M8 chromosome, complete genomehypothetical protein5e-0960.1
NC_007677:241846:252563252563253021459Salinibacter ruber DSM 13855, complete genomehypothetical protein1e-0858.9