Pre_GI: BLASTP Hits

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Query: NC_004578:1719849:1724477 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 1724477, End: 1725226, Length: 750

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007298:2689731:272151627215162722256741Dechloromonas aromatica RCB, complete genomeacid phosphatase7e-59227
NC_016445:2938887:297335129733512974142792Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completestationary phase survival protein SurE6e-58224
NC_008344:2434344:244932524493252450068744Nitrosomonas eutropha C91, complete genomestationary-phase survival protein SurE2e-57222
NC_004757:1021355:103558210355821036325744Nitrosomonas europaea ATCC 19718, complete genomeacid phosphatase2e-55215
NC_015222:2089767:209522020952202095984765Nitrosomonas sp. AL212 chromosome, complete genomestationary-phase survival protein SurE1e-54213
NC_015731:867377:918024918024918767744Nitrosomonas sp. Is79A3 chromosome, complete genomeMultifunctional protein surE3e-54211
NC_008702:1153344:117032411703241171067744Azoarcus sp. BH72, complete genomephosphoric-monoester phosphohydrolase2e-53208
NC_014562:2563466:260542126054212606182762Pantoea vagans C9-1 chromosome, complete genomeSurvival protein surE1e-50199
NC_010468:1029471:105361010536101054371762Escherichia coli ATCC 8739, complete genomestationary-phase survival protein SurE5e-50197
NC_007517:1561466:158709215870921587850759Geobacter metallireducens GS-15, complete genomeSurvival protein SurE5e-50197
NC_010694:2971170:300268530026853003446762Erwinia tasmaniensis, complete genomemultifunctional protein SurE1e-49196
NC_009483:3024115:304469730446973045443747Geobacter uraniireducens Rf4 chromosome, complete genomestationary phase survival protein SurE5e-48191
NC_013894:1380564:138354413835441384296753Thermocrinis albus DSM 14484 chromosome, complete genomestationary-phase survival protein SurE2e-46185
NC_007498:1666242:167404816740481674800753Pelobacter carbinolicus DSM 2380, complete genomestationary-phase survival protein SurE2e-46185
NC_011035:566980:594544594544595290747Neisseria gonorrhoeae NCCP11945 chromosome, complete genomestationary phase survival protein SurE8e-44177
NC_017511:543583:570749570749571495747Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomestationary phase survival protein SurE8e-44177
NC_012918:1814000:181425318142531814999747Geobacter sp. M21 chromosome, complete genomestationary phase survival protein SurE9e-43173
NC_011146:3089297:310860931086093109355747Geobacter bemidjiensis Bem, complete genomestationary-phase survival protein SurE1e-42173
NC_014958:3131191:313326431332643134058795Deinococcus maricopensis DSM 21211 chromosome, complete genomeMultifunctional protein surE1e-36153
NC_018870:1506918:151057415105741511362789Thermacetogenium phaeum DSM 12270 chromosome, complete genome5'-nucleotidase SurE2e-36152
NC_021182:4088000:408920640892064089961756Clostridium pasteurianum BC1, complete genome5'/3'-nucleotidase SurE3e-36151
NC_008312:5357567:535921853592185360024807Trichodesmium erythraeum IMS101, complete genomestationary-phase survival protein SurE2e-35149
NC_014166:3072703:307624530762453077033789Arcobacter nitrofigilis DSM 7299 chromosome, complete genomestationary-phase survival protein SurE7e-35147
NC_011899:948790:951079951079951846768Halothermothrix orenii H 168, complete genomestationary-phase survival protein SurE1e-34147
NC_011978:699500:721495721495722250756Thermotoga neapolitana DSM 4359, complete genome5'-nucleotidase surE1e-34146
NC_009662:1329788:132978813297881330564777Nitratiruptor sp. SB155-2, complete genomestationary phase survival protein SurE1e-33143
NC_017095:1333810:134149313414931342272780Fervidobacterium pennivorans DSM 9078 chromosome, complete genome3'-nucleotidase3e-33142
NC_014314:576465:577468577468578244777Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completestationary-phase survival protein SurE3e-32139
NC_009697:256354:269709269709270467759Clostridium botulinum A str. ATCC 19397 chromosome, completestationary phase survival protein SurE2e-32139
NC_009718:1024000:104214110421411042920780Fervidobacterium nodosum Rt17-B1, complete genomestationary phase survival protein SurE2e-32139
NC_020409:512861:519389519389520141753Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete5'-nucleotidase surE7e-32137
NC_000917:829159:841557841557842342786Archaeoglobus fulgidus DSM 4304, complete genomeacid phosphatase2e-28125
NC_009943:1364536:138923313892331389991759Candidatus Desulfococcus oleovorans Hxd3, complete genomestationary-phase survival protein SurE7e-28124
NC_015320:1159613:116105311610531161838786Archaeoglobus veneficus SNP6 chromosome, complete genomeMultifunctional protein surE4e-27121
NC_014122:842560:849091849091849891801Methanocaldococcus infernus ME chromosome, complete genomestationary-phase survival protein SurE3e-26119
NC_005791:1028500:104266310426631043457795Methanococcus maripaludis S2, complete genomeSurvival protein SurE2e-25115
NC_015847:1119666:113677711367771137571795Methanococcus maripaludis XI chromosome, complete genome5'(3')-nucleotidase/polyphosphatase2e-25115
NC_007798:301456:308166308166308930765Neorickettsia sennetsu str. Miyayama, complete genomeacid phosphatase SurE2e-25115
NC_015574:2501869:252120425212042521980777Methanobacterium sp. SWAN-1 chromosome, complete genomeMultifunctional protein surE2e-24112
NC_009637:302881:319843319843320637795Methanococcus maripaludis C7 chromosome, complete genomestationary phase survival protein SurE5e-24111
NC_009135:494949:497707497707498501795Methanococcus maripaludis C5, complete genomestationary-phase survival protein SurE6e-24111
NC_007955:2281070:230118423011842301969786Methanococcoides burtonii DSM 6242, complete genomestationary-phase survival protein SurE1e-23110
NC_009975:1500978:150313915031391503933795Methanococcus maripaludis C6, complete genomestationary-phase survival protein SurE2e-23109
NC_009634:411599:429025429025429819795Methanococcus vannielii SB chromosome, complete genomestationary phase survival protein SurE4e-23108
NC_015732:2449900:245433524543352455123789Spirochaeta caldaria DSM 7334 chromosome, complete genomeMultifunctional protein surE2e-21102
NC_003551:390268:404865404865405650786Methanopyrus kandleri AV19, complete genomePredicted acid phosphatase2e-21102
NC_014960:3375807:338414233841423384939798Anaerolinea thermophila UNI-1, complete genome5'-nucleotidase SurE2e-1686.3
NC_015385:1122794:113805411380541138860807Treponema succinifaciens DSM 2489 chromosome, complete genomeMultifunctional protein surE2e-1685.9
NC_008312:2690000:270671927067192707417699Trichodesmium erythraeum IMS101, complete genomestationary-phase survival protein SurE8e-1580.9
NC_014623:7133149:714739271473927148183792Stigmatella aurantiaca DW4/3-1 chromosome, complete genome5'-nucleotidase sure2e-1479.7
NC_013790:583474:600503600503601291789Methanobrevibacter ruminantium M1 chromosome, complete genome5'-nucleotidase SurE27e-1477.8
NC_017186:8588000:859318985931898593929741Amycolatopsis mediterranei S699 chromosome, complete genomestationary phase survival protein SurE2e-1273.2
NC_014318:8590078:859313385931338593873741Amycolatopsis mediterranei U32 chromosome, complete genomestationary phase survival protein SurE2e-1273.2
NC_020063:3104000:310747431074743108343870Enterobacteriaceae bacterium strain FGI 57, complete genome5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase3e-1065.5
NC_003364:2111500:211229821122982113047750Pyrobaculum aerophilum str. IM2, complete genomesurE stationary-phase survival protein homolog1e-0963.5
NC_020181:1344259:135570613557061356575870Enterobacter aerogenes EA1509E, complete genome5-nucleotidase SurE2e-0962.8
NC_014814:5422972:542391054239105424686777Mycobacterium sp. Spyr1 chromosome, complete genome5'-nucleotidase ;exopolyphosphatase ;3'-nucleotidase2e-0756.2