Pre_GI: BLASTN Hits

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Query: NC_004567:1089231 Lactobacillus plantarum WCFS1, complete genome

Start: 1089231, End: 1114901, Length: 25671

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012984:10747211074721110359928879Lactobacillus plantarum JDM1, complete genome0856BLASTN svgBLASTP svg
NC_008529:16630001663000169787134872Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete4e-107396BLASTN svgBLASTP svg
NC_004567:10667101066710108627219563Lactobacillus plantarum WCFS1, complete genome5e-39170BLASTN svgBLASTP svg
NC_010999:56191456191459079528882Lactobacillus casei, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015660:29648829648833673140244Geobacillus thermoglucosidasius C56-YS93 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_008525:60698660698663027323288Pediococcus pentosaceus ATCC 25745, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008532:97351097351099609922590Streptococcus thermophilus LMD-9, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008054:16491601649160168970940550Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-0765.9BLASTN svgBLASTP svg
NC_008054:16175441617544164365226109Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-0765.9BLASTN svgBLASTP svg
NC_008529:16344031634403165802723625Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete8e-0763.9BLASTN svgBLASTP svg