Pre_GI: BLASTP Hits

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Query: NC_004567:1089231:1089967 Lactobacillus plantarum WCFS1, complete genome

Start: 1089967, End: 1090554, Length: 588

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012984:1074721:109936710993671099963597Lactobacillus plantarum JDM1, complete genomeintegrase/recombinase1e-103374
NC_014554:1019730:104094210409421041406465Lactobacillus plantarum subsp. plantarum ST-III chromosome,integrase2e-64244
NC_016052:2335648:234426723442672344818552Tetragenococcus halophilus NBRC 12172, complete genomeputative site-specific recombinase1e-44179
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase3e-36151
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase2e-31135
NC_010516:2676746:269860026986002699145546Clostridium botulinum B1 str. Okra, complete genomesite-specific recombinase, phage integrase family1e-30132
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase1e-30132
NC_009697:2558286:258053225805322581077546Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase3e-30131
NC_009442:1446508:145370114537011454273573Streptococcus suis 05ZYH33 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein2e-30131
NC_009443:1445936:145312714531271453699573Streptococcus suis 98HAH33, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein2e-30131
NC_012925:1357783:136497613649761365518543Streptococcus suis P1/7, complete genomephage integrase family protein2e-30131
NC_012924:1446190:145338314533831453925543Streptococcus suis SC84, complete genomephage integrase family protein2e-30131
NC_012926:1496510:150370315037031504245543Streptococcus suis BM407 chromosome, complete genomephage integrase family protein2e-30131
NC_012658:1405788:141169614116961412241546Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage integrase family site-specific recombinase7e-30130
NC_009697:3110772:312844431284443128989546Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase9e-30129
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein1e-28126
NC_009699:3429817:345181334518133452358546Clostridium botulinum F str. Langeland chromosome, complete genomephage integrase family site specific recombinase5e-28124
NC_017297:3428429:345042734504273450972546Clostridium botulinum F str. 230613 chromosome, complete genomesite-specific recombinase, phage integrase family5e-28124
NC_004116:1827351:185300518530051853547543Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family4e-28124
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family4e-28124
NC_010382:3643288:366613336661333666714582Lysinibacillus sphaericus C3-41, complete genomephage integrase family site specific recombinase3e-27121
NC_010723:2269372:228565622856562286198543Clostridium botulinum E3 str. Alaska E43, complete genomesite-specific recombinase, phage integrase family8e-27120
NC_013766:679906:692805692805693347543Listeria monocytogenes 08-5578 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family3e-26118
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase3e-26117
NC_015875:34270:484594845949001543Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein8e-26116
NC_013891:1639694:165579916557991656341543Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomesite-specific recombinase, phage integrase family1e-24112
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein7e-23107
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family1e-22106
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated1e-22106
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein8e-23106
NC_015690:1186545:120681212068121207384573Paenibacillus mucilaginosus KNP414 chromosome, complete genomeintegrase family protein2e-22105
NC_015634:2595500:262310826231082623683576Bacillus coagulans 2-6 chromosome, complete genomeDNA integration/recombination/inversion protein1e-21102
NC_006512:696000:703511703511704071561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family5e-2097.4
NC_009092:1441813:145236114523611452921561Shewanella loihica PV-4, complete genomephage integrase family protein3e-1994.7
NC_008529:887008:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase9e-1993.2
NC_008529:906576:916198916198916764567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase9e-1993.2
NC_008529:887008:916198916198916764567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase9e-1993.2
NC_008529:918277:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase9e-1993.2
NC_008529:906576:942654942654943220567Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeIntegrase9e-1993.2
NC_020134:1941523:195526219552621955822561Clostridium stercorarium subsp. stercorarium DSM 8532, completeintegrase family protein3e-1891.7
NC_006512:1722138:174273917427391743299561Idiomarina loihiensis L2TR, complete genomeIntegrase/recombinase, XerC/XerD family4e-1890.9
NC_021184:3533500:354809635480963548656561Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD8e-1890.1
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1789.4
NC_008322:2077628:209227720922772092891615Shewanella sp. MR-7, complete genomephage integrase family protein2e-1788.6
NC_008577:2115440:212711521271152127729615Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein3e-1788.2
NC_013456:212150:227153227153227713561Vibrio sp. Ex25 chromosome 1, complete genomesite-specific recombinase phage integrase family4e-1787.8
NC_012796:4075583:416552141655214166078558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase4e-1787.8
NC_008321:1993541:200790620079062008544639Shewanella sp. MR-4, complete genomephage integrase family protein8e-1786.7
NC_016803:3502749:352127235212723521871600Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein1e-1685.9
NC_009012:2706755:272158027215802722146567Clostridium thermocellum ATCC 27405, complete genomephage integrase2e-1685.5
NC_009901:1516340:152799315279931528553561Shewanella pealeana ATCC 700345, complete genomeintegrase family protein2e-1685.5
NC_015567:1127780:113893611389361139487552Serratia sp. AS9 chromosome, complete genomeintegrase family protein2e-1685.1
NC_015566:1127595:113875111387511139302552Serratia sp. AS12 chromosome, complete genomeintegrase family protein2e-1685.1
NC_012796:1049034:109984510998451100402558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1685.1
NC_012796:3374911:342491734249173425474558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase8e-1683.6
NC_018678:2382708:239659923965992397159561Alteromonas macleodii str. 'English Channel 673' chromosome,integrase family protein1e-1582.8
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1582.4
NC_016894:3988180:399539039953903996004615Acetobacterium woodii DSM 1030 chromosome, complete genomeprophage LambdaBa04 site-specific recombinase phage integrase family2e-1582
NC_012796:1645856:166448516644851665042558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-1581.6
NC_012796:77071:953999539995956558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-1581.6
NC_016894:3580274:358909935890993589713615Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein6e-1580.9
NC_010674:950276:951654951654952292639Clostridium botulinum B str. Eklund 17B, complete genomesite-specific recombinase5e-1580.9
NC_012796:1049034:113043711304371130994558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-1580.9
NC_012796:1049034:106572110657211066278558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-1580.5
NC_014844:511552:517143517143517697555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein1e-1479.7
NC_012796:3600630:362703436270343627591558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1479.3
NC_012796:77071:114358114358114915558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-1479.3
NC_012796:3600630:364833536483353648892558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase8e-1477
NC_014371:1076642:107879210787921079379588Prevotella melaninogenica ATCC 25845 chromosome chromosome II,site-specific recombinase, phage integrase family8e-1477
NC_020409:1173796:118265711826571183256600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase family protein7e-1477
NC_011883:2680380:270035627003562700949594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein6e-1373.9
NC_011883:2680380:269246126924612693054594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein6e-1373.9
NC_009617:1085000:108757010875701088175606Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage integrase family protein6e-1373.9
NC_012796:3600630:361445136144513615008558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1272.8
NC_011773:1277606:129570712957071296627921Bacillus cereus AH820 chromosome, complete genomeintegrase/recombinase3e-1271.6
NC_012563:1681639:170013117001311700736606Clostridium botulinum A2 str. Kyoto, complete genomephage integrase family protein5e-1270.9
NC_012108:2159230:216676321667632167356594Desulfobacterium autotrophicum HRM2, complete genomesite-specific recombinase/integrase XerD5e-1270.9
NC_012416:753500:784436784436785356921Wolbachia sp. wRi, complete genomesite-specific recombinase, phage integrase family6e-1270.5
NC_020291:1122282:112310111231011123706606Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage integrase family protein1e-1169.3
NC_008497:1111891:111574411157441116331588Lactobacillus brevis ATCC 367, complete genomeIntegrase3e-1168.2
NC_014011:1139818:115296411529641153572609Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein5e-1167.8
NC_015573:813000:829706829706830560855Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein2e-0962.4
NC_014377:961259:973403973403974335933Thermosediminibacter oceani DSM 16646 chromosome, complete genomeintegrase family protein2e-0962.4
NC_013009:353690:374974374974375897924Neorickettsia risticii str. Illinois, complete genomesite-specific recombinase, phage integrase family3e-0961.6
NC_016047:2480921:249755124975512498525975Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeDNA integration/recombination protein3e-0961.6
NC_004663:3285526:328897532889753289967993Bacteroides thetaiotaomicron VPI-5482, complete genomeputative integrase/recombinase6e-0960.5
NC_015638:2045500:205110020511002051990891Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTyrosine recombinase xerC2e-0859.3
NC_008346:1499963:152017915201791521099921Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeintegrase/recombinase2e-0858.9
NC_014011:962474:986923986923987858936Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein2e-0858.9
NC_020908:4263552:426684742668474267752906Octadecabacter arcticus 238, complete genomeintegrase/recombinase2e-0858.9
NC_020908:2466446:247991324799132480827915Octadecabacter arcticus 238, complete genomeintegrase/recombinase2e-0858.9
NC_010627:233572:233572233572234450879Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceintegrase family protein2e-0858.5
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD3e-0858.5
NC_009441:3174588:318173331817333182308576Flavobacterium johnsoniae UW101 chromosome, complete genomephage integrase3e-0858.2
NC_015410:1324313:1339411133941113404391029Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein4e-0857.8
NC_010424:825117:828685828685829536852Candidatus Desulforudis audaxviator MP104C, complete genomephage integrase family protein6e-0857.4
NC_010625:1602191:160771416077141608592879Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein7e-0857
NC_009253:829913:844973844973845854882Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein1e-0756.6
NC_004461:921364:929825929825930715891Staphylococcus epidermidis ATCC 12228, complete genomexerC protein1e-0756.2
NC_009253:389835:392779392779393693915Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-0755.8
NC_008740:220642:2274462274462285641119Marinobacter aquaeolei VT8, complete genomephage integrase family protein2e-0755.8
NC_014958:557208:572861572861573754894Deinococcus maricopensis DSM 21211 chromosome, complete genomeintegrase family protein2e-0755.5
NC_014329:1041556:104443210444321045364933Corynebacterium pseudotuberculosis FRC41 chromosome, completetyrosine recombinase4e-0754.7
NC_016781:1039716:104442310444231045355933Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetyrosine recombinase XerD4e-0754.7
NC_017031:1039548:104425510442551045187933Corynebacterium pseudotuberculosis P54B96 chromosome, completetyrosine recombinase XerD4e-0754.7
NC_017301:1037519:104406810440681045000933Corynebacterium pseudotuberculosis C231 chromosome, completetyrosine recombinase XerD4e-0754.7
NC_017303:1039562:104426910442691045201933Corynebacterium pseudotuberculosis I19 chromosome, complete genometyrosine recombinase XerD4e-0754.7
NC_017305:1037133:104184010418401042772933Corynebacterium pseudotuberculosis PAT10 chromosome, completetyrosine recombinase XerD4e-0754.7
NC_020302:85821:1265931265931278041212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase4e-0754.7
NC_020302:2219378:2242156224215622433671212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase4e-0754.7
NC_014394:2111985:211231021123102112963654Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein7e-0753.9
NC_014721:2135500:215045321504532151325873Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein8e-0753.5
NC_015410:1324313:133164413316441332582939Pseudomonas mendocina NK-01 chromosome, complete genomeputative integrase8e-0753.5
NC_015519:2489728:250341725034172504274858Tepidanaerobacter sp. Re1 chromosome, complete genomeintegrase family protein7e-0753.5
NC_015510:644500:6513756513756524421068Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeintegrase family protein1e-0652.8
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase1e-0652.8
NC_005956:1888500:189043218904321891370939Bartonella henselae str. Houston-1, complete genomeIntegrase /recombinase xerD1e-0652.8
NC_014394:1594071:160976616097661610419654Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein2e-0652.8
NC_013926:614206:629210629210630064855Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein2e-0652.4
NC_015578:2026741:2031219203121920324061188Treponema primitia ZAS-2 chromosome, complete genomephage integrase family protein2e-0652
NC_018605:558391:577047577047577649603Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeProbable tyrosine recombinase XerC-like4e-0651.6
NC_007168:1705763:171536717153671716260894Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-0651.6
NC_021184:148000:156671156671157588918Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD3e-0651.6
NC_016510:2426150:246974824697482470641894Flavobacterium columnare ATCC 49512 chromosome, complete genomeintegrase/recombinase XerC4e-0651.2
NC_015167:569569:590349590349591239891Cellulophaga lytica DSM 7489 chromosome, complete genomeTyrosine recombinase xerC4e-0651.2
NC_019815:761480:775648775648776571924Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiintegrase/recombinase XerD4e-0651.2
NC_016001:905164:911276911276912172897Flavobacterium branchiophilum, complete genomeTyrosine recombinase XerC4e-0651.2
NC_009441:4384500:439556743955674396091525Flavobacterium johnsoniae UW101 chromosome, complete genomephage integrase5e-0650.8
NC_017289:834781:843508843508844407900Chlamydophila psittaci 01DC11 chromosome, complete genomesite-specific tyrosine recombinase xerD8e-0650.4
NC_017291:829577:840689840689841588900Chlamydophila psittaci C19/98 chromosome, complete genomesite-specific tyrosine recombinase xerD8e-0650.4
NC_017292:834749:843476843476844375900Chlamydophila psittaci 02DC15 chromosome, complete genomesite-specific tyrosine recombinase xerD8e-0650.4
NC_015470:831863:842975842975843874900Chlamydophila psittaci 6BC chromosome, complete genomesite-specific tyrosine recombinase xerD7e-0650.4
NC_009253:2315958:232009723200972321002906Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein7e-0650.4
NC_016791:1341858:134375713437571344395639Clostridium sp. BNL1100 chromosome, complete genomesite-specific recombinase XerD7e-0650.4
NC_017208:3816753:384609438460943846993900Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesite-specific tyrosine recombinase XerC7e-0650.4
NC_010337:591264:5981275981275993921266Heliobacterium modesticaldum Ice1, complete genomephage integrase9e-0650.1
NC_018870:757416:7642797642797655441266Thermacetogenium phaeum DSM 12270 chromosome, complete genomephage integrase9e-0650.1
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase1e-0550.1