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Query: NC_004567:1089231:1089231 Lactobacillus plantarum WCFS1, complete genome

Start: 1089231, End: 1089578, Length: 348

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014377:1943476:197040919704091971092684Thermosediminibacter oceani DSM 16646 chromosome, complete genometransposase IS3/IS911 family protein7e-22102
NC_014377:2033781:204929120492912049974684Thermosediminibacter oceani DSM 16646 chromosome, complete genome1e-2098.2
NC_017068:2436960:244113124411312441802672Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative transposase OrfA2e-1994.7
NC_016935:4038265:405431340543134054990678Paenibacillus mucilaginosus 3016 chromosome, complete genometransposase IS3/IS911 family protein1e-1891.7
NC_016935:3103430:312271331227133123390678Paenibacillus mucilaginosus 3016 chromosome, complete genometransposase IS3/IS911 family protein1e-1891.7
NC_016935:2503071:252415025241502524827678Paenibacillus mucilaginosus 3016 chromosome, complete genometransposase IS3/IS911 family protein1e-1891.7
NC_016935:2347691:242852924285292429206678Paenibacillus mucilaginosus 3016 chromosome, complete genometransposase IS3/IS911 family protein1e-1891.7
NC_016935:1636278:171309717130971713774678Paenibacillus mucilaginosus 3016 chromosome, complete genometransposase IS3/IS911 family protein1e-1891.7
NC_008262:2824503:284498428449842845655672Clostridium perfringens SM101, complete genomehypothetical protein4e-1889.7
NC_015760:8914:253182531825995678Streptococcus salivarius CCHSS3, complete genometransposase4e-1786.7
NC_010610:1765000:177353517735351774149615Lactobacillus fermentum IFO 3956, complete genomeputative transposase6e-1786.3
NC_010610:1765000:178341617834161784108693Lactobacillus fermentum IFO 3956, complete genomeCOG29633e-1684
NC_015589:814530:822886822886823569684Desulfotomaculum ruminis DSM 2154 chromosome, complete genometransposase IS3/IS911 family protein1e-1582
NC_015737:2288032:230300323030032303686684Clostridium sp. SY8519, complete genomehypothetical protein2e-1580.9
NC_002952:2390668:239185323918532392608756Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative insertion element protein1e-1478.6
NC_017337:2588331:259075025907502591505756Staphylococcus aureus subsp. aureus ED133 chromosome, completeputative insertion element protein1e-1478.2
NC_010999:561914:578205578205578933729Lactobacillus casei, complete genomeISSth1, transposase (Orf1), IS3 family1e-1478.2
NC_012470:1390285:139911513991151399846732Streptococcus equi subsp. zooepidemicus, complete genometransposase7e-1372.8
NC_004567:1089231:110490811049081105195288Lactobacillus plantarum WCFS1, complete genomehypothetical protein5e-0649.7