Pre_GI: BLASTN Hits

Some Help

Query: NC_004557:2552418 Clostridium tetani E88, complete genome

Start: 2552418, End: 2574319, Length: 21902

Host Lineage: Clostridium tetani; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a virulent nonsporulating variant of strain Massachusetts used in vaccine production. Causes tetanus. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism causes tetanus (lockjaw) in humans. At the tissue level, the bacterium then releases an exotoxin called tetanospasmin that causes certain nervous system irregularities by means of retrograde tramsmission through neurons to the brain. If nervous impulses cannot be checked by normal inhibitory mechanisms, it produces the generalized muscular spasms characteristic of tetanus.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome0821BLASTN svgBLASTP svg
NC_012563:37298173729817376659036774Clostridium botulinum A2 str. Kyoto, complete genome1e-177630BLASTN svgBLASTP svg
NC_008593:21367592136759215512718369Clostridium novyi NT, complete genome7e-164585BLASTN svgBLASTP svg
NC_010723:37174137174139352221782Clostridium botulinum E3 str. Alaska E43, complete genome1e-162581BLASTN svgBLASTP svg
NC_010520:35800003580000360470824709Clostridium botulinum A3 str. Loch Maree, complete genome7e-161575BLASTN svgBLASTP svg
NC_008262:24980002498000252144223443Clostridium perfringens SM101, complete genome1e-146527BLASTN svgBLASTP svg
NC_010674:37062937062939810727479Clostridium botulinum B str. Eklund 17B, complete genome6e-143515BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome8e-93349BLASTN svgBLASTP svg
NC_008593:15131071513107153682423718Clostridium novyi NT, complete genome1e-76295BLASTN svgBLASTP svg
NC_014393:36509573650957366964218686Clostridium cellulovorans 743B chromosome, complete genome2e-75291BLASTN svgBLASTP svg
NC_010516:34660003466000348809922100Clostridium botulinum B1 str. Okra, complete genome9e-71276BLASTN svgBLASTP svg
NC_020291:49100049100051106420065Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4e-70274BLASTN svgBLASTP svg
NC_020291:22914182291418231430022883Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-46194BLASTN svgBLASTP svg
NC_010674:31412283141228316494623719Clostridium botulinum B str. Eklund 17B, complete genome2e-40174BLASTN svgBLASTP svg
NC_011898:426951*42695146616239212Clostridium cellulolyticum H10, complete genome2e-37165BLASTN svgBLASTP svg
NC_014328:43160084316008434476228755Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-30141BLASTN svgBLASTP svg
NC_010723:62292862292864247719550Clostridium botulinum E3 str. Alaska E43, complete genome3e-30141BLASTN svgBLASTP svg
NC_010674:65859665859667712118526Clostridium botulinum B str. Eklund 17B, complete genome3e-30141BLASTN svgBLASTP svg
NC_015275:3594890*3594890363588740998Clostridium lentocellum DSM 5427 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_015958:677500*67750069545217953Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome8e-22113BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome5e-20107BLASTN svgBLASTP svg
NC_012225:21989872198987222132922343Brachyspira hyodysenteriae WA1, complete genome5e-20107BLASTN svgBLASTP svg
NC_010516:23740002374000239681422815Clostridium botulinum B1 str. Okra, complete genome5e-20107BLASTN svgBLASTP svg
NC_010723:13792561379256140062221367Clostridium botulinum E3 str. Alaska E43, complete genome8e-19103BLASTN svgBLASTP svg
NC_010674:13904731390473141116620694Clostridium botulinum B str. Eklund 17B, complete genome8e-19103BLASTN svgBLASTP svg
NC_009089:96595996595998833722379Clostridium difficile 630, complete genome3e-18101BLASTN svgBLASTP svg
NC_013316:89178289178291434722566Clostridium difficile R20291, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_019978:31534631534633383318488Halobacteroides halobius DSM 5150, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010718:46440546440548434419940Natranaerobius thermophilus JW/NM-WN-LF, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_020291:5641444*5641444566381622373Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003210:40374340374342609922357Listeria monocytogenes EGD-e, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009850:41309341309343688323791Arcobacter butzleri RM4018, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015949:2002752*2002752202359920848Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012778:403962*40396242480720846Eubacterium eligens ATCC 27750, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003454:20807052080705210460123897Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete4e-1177.8BLASTN svgBLASTP svg
NC_014330:1113145*1113145114959936455Brachyspira pilosicoli 95/1000 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018607:290500*29050033195841459Brachyspira pilosicoli B2904 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018604:2579000*2579000263363754638Brachyspira pilosicoli WesB complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020156:90375490375492804124288Nonlabens dokdonensis DSW-6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019908:2068631*2068631210767339043Brachyspira pilosicoli P43/6/78 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010516:35450173545017356809923083Clostridium botulinum B1 str. Okra, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020164:88751088751091047422965Staphylococcus warneri SG1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010718:1959517*1959517198298623470Natranaerobius thermophilus JW/NM-WN-LF, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006833:409599*40959944663937041Wolbachia endosymbiont strain TRS of Brugia malayi, complete4e-0867.9BLASTN svgBLASTP svg
NC_020134:2832857*2832857285642223566Clostridium stercorarium subsp. stercorarium DSM 8532, complete2e-0765.9BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003366:12878312878314709918317Clostridium perfringens str. 13, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018664:28776928776930695419186Clostridium acidurici 9a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013171:636293*63629365943323141Anaerococcus prevotii DSM 20548, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002976:15407941540794156113820345Staphylococcus epidermidis RP62A, complete genome3e-0661.9BLASTN svgBLASTP svg